2010

• Bourrellier, A. B. F., Valot, B., Guillot, A., Ambard-Bretteville, F., Vidal, J. & Hodges, M. (2010) Chloroplast acetyl-CoA carboxylase activity is 2-oxoglutarate-regulated by interaction of PII with the biotin carboxyl carrier subunit. Proc. Natl. Acad. Sci. U. S. A. 107 502–507.
• Durand, E., Tenaillon, M. I., Ridel, C., Coubriche, D., Jamin, P., Jouanne, S., Ressayre, A., Charcosset, A. & Dillmann, C. (2010) Standing variation and new mutations both contribute to a fast response to selection for flowering time in maize inbreds. BMC Evol Biol, 10 2. doi:10.1186/1471-2148-10-2
• Fiévet, J. B., Dillmann, C., & de Vienne, D. (2010). Systemic properties of metabolic networks lead to an epistasis-based model for heterosis. Theor Appl Genet, 120(2), 463–473.
• Hoogland, C., O'Gorman, M., Bogard, P., Gibson, F., Berth, M., Cockell, S., Ekefjärd, A., Forsstrom-Olsson, O., Kapferer, A., Nilsson, M., Martínez-Bartolomé, S., Albar, J., Echevarría-Zomeño, S., Joets, J., Binz, P.-A., Taylor, C. & Dowsey, A. (2010) Guidelines for reporting the use of gel image informatics in proteomics. Nature Biotech. in press.
• Junier, I., Martin, O., Képès, F. (2010) Spatial and Topological Organization of DNA Chains Induced by Gene Co-localization. PLoS Comput Biol, 6 e1000678.
• Marmagne, A., Brabant, P., Thiellement, H. & Alix, K. (2010) Analysis of gene expression in resynthesized Brassica napus allotetraploids: Transcriptional changes do not explain differential protein regulation. New Phytol, 186 216–227.
• Parisod, C., Alix, K., Just, J., Petit, M., Sarilar, V., Mhiri, C., Ainouche, M., Chalhoub, B., Grandbastien, M.-A. (2010) Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol, 186 37–45
• Rhoné, B., Vitalis, R., Goldringer, I. & Bonnin, I. (2010) Evolution of flowering time in experimental wheat populations: a comprehensive approach to detect genetic signatures of natural selection. Evolution, (in press)
• Santure, A. W., Ewen, J. G., Sicard, D., Roff, D. A. & Moller, A. P. (2010) Population structure in the barn swallow, Hirundo rustica: A comparison between neutral DNA markers and quantitative traits. Biol J Linn Soc Lond, 99 306–314.

2009

• Albert, B., Gouyon, P.-H., Ressayre, A. (2009) Microsporogenesis variation in Codiaeum producing inaperturate pollen grain. C R Biol, 332 507–516.
• Albertin, W., Langella, O., Joets, J., Négroni, L., Zivy, M., Damerval, C., Thiellement, H. (2009) Comparative proteomics of leaf, stem, and root tissues of synthetic Brassica napus. Proteomics, 9 793–799.
• Albertin, W., Marullo, P., Aigle, M., Bourgais, A., Bely, M., Dillmann, C., de Vienne, D., Sicard, D. (2009) Evidence for autotetraploidy associated with reproductive isolation in Saccharomyces cerevisiae: Towards a new domesticated species. J Evol Biol,DOI : 10.1111/j.1420-9101.2009.01828.x
• Aloui, A., Recorbet, G., Gollotte, A., Robert, F., Valot, B., Gianinazzi-Pearson, V., Aschi-Smiti, S., Dumas-Gaudot, E. (2009) On the mechanisms of cadmium stress alleviation in Medicago truncatula by arbuscular mycorrhizal symbiosis: A root proteomic study. Proteomics, 9 420–433.
• Ducrocq, S., Giauffret, C., Madur, D., Combes, V., Dumas, F., Jouanne, S., Coubriche, D., Jamin, P., Moreau, L. & Charcosset, A. (2009) Fine mapping and haplotype structure analysis of a major flowering time quantitative trait locus on maize chromosome 10. Genetics, 183 1555–1563.
• Edelist, C., Raffoux, X., Falque, M., Dillmann, C., Sicard, D., Rieseberg, L. H., Karrenberg, S. (2009) Differential expression of candidate salt-tolerance genes in the halophyte Helianthus paradoxus and its glycophyte progenitors H. annuus and H. petiolaris (Asteraceae). Am. J. Bot. 96 1830–1838.
• Falque, M., Anderson, L. K., Stack, S. M., Gauthier, F. & Martin, O. C. (2009) Two Types of Meiotic Crossovers Coexist in Maize. Plant Cell, 21(12) 3915–3925.
• Frottin, F., Espagne, C., Traverso, J. A., Mauve, C., Valot, B., Lelarge-Trouverie, C., Zivy, M., Noctor, G., Meinnel, T., Giglione, C. (2009) Cotranslational proteolysis dominates glutathione homeostasis to support proper growth and development. Plant Cell, 21 3296–3314.
• Jabbour, F., Nadot, S., Damerval, C. (2009) Evolution of floral symmetry: A state of the art. C R Biol, 332 219–231.
• Johannes, F., Porcher, E., Teixeira, F. K., Saliba-Colombani, V., Simon, M., Agier, N., Bulski, A., Albuisson, J., Heredia, F., Audigier, P., Bouchez, D., Dillmann, C., Guerche, P., Hospital, F., Colot, V. (2009) Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet, 5 e1000530.
• Legrand, D., Tenaillon, M. I., Matyot, P., Gerlach, J., Lachaise, D.,Cariou, M.-L. (2009) Species-wide Genetic Variation and Demographic History of Drosophila sechellia, a Species Lacking Population Structure. Genetics, 182 1197–1206.
• Manicacci, D., Camus-Kulandaivelu, L., Fourmann, M., Arar, C., Barrault, S., Rousselet, A., Feminias, N., Consoli, L., Francès, L., Méchin, V., Murigneux, A., Prioul, J.-L., Charcosset, A., Damerval, C. (2009) Epistatic Interactions between Opaque2 Transcriptional Activator and Its Target Gene CyPPDK1 Control Kernel Trait Variation in Maize. Plant Physiol, 150 506–520.
• Martin, O. C., Wagner, A. (2009) Effects of recombination on complex regulatory circuits. Genetics, 183 673–84, 1SI-8S.
• Marullo, P., Mansour, C., Dufour, M., Albertin, W., Sicard, D., Bely, M., Dubourdieu, D. (2009) Genetic improvement of thermo-tolerance in wine Saccharomyces cerevisiae strains by a backcross approach. FEMS Yeast Res, DOI : 10.1111/j.1567-1364.2009.00550.x
• Ostergard, H., Finckh, M. R., Fontaine, L., Goldringer, I., Hoad, S. P., Kristensen, K., van Bueren, E. L. T., Mascher, F., Munk, L., & Wolfe, M. S. (2009). Time for a shift in crop production: Embracing complexity through diversity at all levels. J Sci Food Agric, 89(9), 1439–1445.
• Ross-Ibarra, J., Tenaillon, M., Gaut, B. S. (2009) Historical divergence and gene flow in the genus Zea. Genetics, 181 1399–1413.
• Saintenac, C., Falque, M., Martin, O. C., Paux, E., Feuillet, C., Sourdille, P. (2009) Detailed recombination studies along chromosome 3B provide new insights on crossover distribution in wheat (Triticum aestivum L.). Genetics, 181 393–403.
• Spor, A., Nidelet, T., Simon, J., Bourgais, A., de Vienne, D., & Sicard, D. (2009). Niche-driven evolution of metabolic and life-history strategies in natural and domesticated populations of saccharomyces cerevisiae. BMC Evol Biol, 9, 296.
• Sirichandra, C., Gu, D., Hu, H.-C., Davanture, M., Lee, S., Djaoui, M., Valot, B., Zivy, M., Leung, J., Merlot, S., Kwak, J. M. (2009) Phosphorylation of the Arabidopsis AtrbohF NADPH oxidase by OST1 protein kinase. FEBS Lett, 583 2982–2986.
• Vincent, D., Balesdent, M.-H., Gibon, J., Claverol, S., Lapaillerie, D., Lomenech, A.-M., Blaise, F., Rouxel, T., Martin, F., Bonneu, M., Amselem, J., Dominguez, V., Howlett, B. J., Wincker, P., Joets, J., Lebrun, M.-H., Plomion, C. (2009) Hunting down fungal secretomes using liquid-phase IEF prior to high resolution 2-DE. Electrophoresis, 30 4118–4136.
• Zerjal, T., Joets, J., Alix, K., Grandbastien, M.-A. & Tenaillon, M. I. (2009) Contrasting evolutionary patterns and target specificities among three Tourist-like MITE families in the maize genome. Plant Mol Biol, 71 99–114.

2008

• Alix, K., Joets, J., Ryder, C. D., Moore, J., Barker, G. C., Bailey, J. P., King, G. J., Heslop-Harrison, J. S. (2008) The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation. Plant Journal, 56 1030–1044.
• Blanc,G. Charcosset,A. Veyrieras,J B. Gallais,A. Moreau,L. 2008. Marker-assisted selection efficiency in multiple connected populations: a simulation study based on the results of a QTL detection experiment in maize Euphytica 161 : 71-84.
• Bonnin,I. Rousset,M. Madur,D. Sourdille,Pierre. Dupuits,C. Brunel,D. Goldringer,I. 2008. FT genome A and D polymorphisms are associated with the variation of earliness components in hexaploid wheat. Theor Appl Genet 116 : 383-394.
• Camus-Kulandaivelu,L. Chevin,L M. Tollon-Cordet,C. Charcosset,A. Manicacci,D. Tenaillon,M I. 2008. Patterns of molecular evolution associated with two selective sweeps in the Tb1-Dwarf8 region in maize. Genetics 180 : 1107-1121.
• Coque,M. Martin,A. Veyrieras,J B. Hirel,B. Gallais,A. 2008. Genetic variation for N-remobilization and postsilking N-uptake in a set of maize recombinant inbred lines. 3. QTL detection and coincidences. Theor Appl Genet 117(5) : 729-747.
• Ducrocq,S. Madur,D. Veyrieras,J B. Camus-Kulandaivelu,L. Kloiber-Maitz,M. Presterl,T. Ouzunova,M. Manicacci,D. Charcosset,A. 2008. Key impact of Vgt1 on flowering time adaptation in maize: evidence from association mapping and ecogeographical information. Genetics 178 : 2433-2437.
• Garcia-Verdugo,I. Synguelakis,Monique. Degrouard,J. Franco,C A. Valot,B. Zivy,M. Chaby,R. Tanfin,Z. 2008. Interaction of surfactant protein A with the intermediate filaments desmin and vimentin. Biochemistry 47 : 5127-5138.
• Jabbour,F. Damerval,C. Nadot,S. 2008. Evolutionary Trends in the Flowers of Asteridae: Is Polyandry an Alternative to Zygomorphy? Ann Bot (Lond) 102(2) : 153-165.
• Jorg,T. Martin,O. Wagner,A. 2008. Neutral network sizes of biological RNA molecules can be computed and are not atypically small. BMC Bioinformatics 9 : 464.
• Kuang,H H. van Eck,H J. Sicard,D. Michelmore,R. Nevo,E. 2008. Evolution and genetic population structure of prickly lettuce (Lactuca serriola) and its RGC2 resistance gene cluster Genetics 178 : 1547-1558.
• Martin,O C. Wagner,A. 2008. Multifunctionality and robustness trade-offs in model genetic circuits Biophysical Journal 94 : 2927-2937.
• Pouilly, N., Delourme, R., Alix, K., Jenczewski, E. (2008) Repetitive sequence-derived markers tag centromeres and telomeres and provide insights into chromosome evolution in Brassica napus. Chromosome Res, 16 683–700.
• Raquin,A L. Brabant,P. Rhone,B. Balfourier,F. Leroy,P. Goldringer,I. 2008. Soft selective sweep near a gene that increases plant height in wheat Molecular Ecology 17 : 741-756.
• Raquin, A.-L., Depaulis, F., Lambert, A., Galic, N., Brabant, P., & Goldringer, I. (2008). Experimental estimation of mutation rates in a wheat population with a gene genealogy approach. Genetics, 179(4), 2195–2211.
• Rhone,B. Remoué,C. Galic,N. Goldringer,I. Bonnin,I. 2008. Insight into the genetic bases of climatic adaptation in experimentally evolving wheat populations. Mol Ecol 17 : 930-943.
• Siol,M. Prosperi,J M. Bonnin,I. Ronfort,J. 2008. How multilocus genotypic pattern helps to understand the history of selfing populations: a case study in Medicago truncatula. Heredity 100 : 517-525.
• Spor,A. Wang,S. Dillmann,C. de Vienne,D. Sicard,D. 2008. "Ant" and "grasshopper" life-history strategies in Saccharomyces cerevisiae. PLoS ONE 3 : e1579.
• Tenaillon,M I. Austerlitz,F. Tenaillon,O. 2008. Apparent mutational hotspots and long distance linkage disequilibrium resulting from a bottleneck Journal Of Evolutionary Biology 21 : 541-550.
• Tenaillon,M I. Tiffin,P L. 2008. The quest for adaptive evolution: a theoretical challenge in a maze of data Current Opinion In Plant Biology 11 : 110-115.
• Thuillet,A C. Tenaillon,M I. Falque,M. Mitchell,S E. Kresovich,S. Stack,S M. Gaut,B. Doebley,J. 2008. A weak effect of background selection on trinucleotide microsatellites in maize Journal Of Heredity 99 : 45-55.
• Wolfe, M. S., Baresel, J. P., Desclaux, D., Goldringer, I., Hoad, S., Kovacs, G., Loeschenberger, F., Miedaner, T., Ostergard, H., van Bueren, L. E. T. (2008). Developments in breeding cereals for organic agriculture. Euphytica, 163(3), 323–346.
• Xiong,T C. Coursol,S. Grat,S. Ranjeva,R. Mazars,C. 2008. Sphingolipid metabolites selectively elicit increases in nuclear calcium concentration in cell suspension cultures and in isolated nuclei of tobacco. Cell Calcium 43 : 29-37.

2007

• Albertin W, Alix K, Balliau T, Brabant P, Davanture M, Malosse C, Valot B & Thiellement H. (2007). Differential regulation of gene products in newly synthesized Brassica napus allotetraploids is not related to gene function nor subcellular localization . BMC Genomics 8 : 56
• Alix K., Lariagon C., Delourme R. and Manzanares-Dauleux M. (2007). Exploiting natural genetic diversity and mutant resources of Arabidopsis thaliana to study the A. thaliana - Plasmodiophora brassicae interaction. Plant Breeding 126: 218-221.
• Birolleau-Touchard, C., Hanocq, E., Bouchez, A., Bauland, C., Dourlen, I., Seret, J.-P., Rabier, D., Hervet, S., Allienne, J.-F., Lucas, P., Jaminon, O., Etienne, R., Baudhuin, G. & Giauffret, C. (2007) The use of MapPop1.0 for choosing a QTL mapping sample from an advanced backcross population. Theor Appl Genet, 114 1019–1028.
• Camus-Kulandaivelu, L., J.B. Veyrieras, B. Gouesnard, A. Charcosset, and D. Manicacci. 2007. Evaluating the reliability of STRUCTURE outputs in case of relatedness between individuals. Crop Sci 47:885-890
• Ciliberti S. , Martin O.C. and Wagner A. (2007) Robustness Can Evolve Gradually in Complex Regulatory Gene Networks with Varying Topology, PLoS Comput Biol 3(2): e15.
• CilibertiS. , Martin O.C. and Wagner A. (2007) Innovation and robustness in complex regulatory gene networks, PNAS 104(34):13591-6.
• Damerval C, Le Guilloux M, Jager M, Charon C. (2007). Diversity and evolution of CYCLOIDEA-Like TCP genes in relation to flower development in Papaveraceae. Plant Physiol. 143: 759-72.
• Damerval C et Nadot S. (2007). Evolution of perianth and stamen characteristics with respect to floral symmetry in Ranunculales. /Ann. Bot./doi: 10.1093/aob/mcm041
• Drouaud, J., Mercier, R, Chelysheva, L., Bérard, A., Falque, M., Martin, O., Zanni, V., Brunel, D., and C. Mézard. (2007). Sex-specific crossover distribution and variations in interference level along Arabidopsis thaliana chromosome 4. PLoS Genet 3(6): e106
• Falque, M., Mercier, R., Mézard, C., de Vienne, D., and O.C. Martin. (2007). Patterns of recombination rate along chromosomes : importance of interference and obligate chiasma, Genetics 176: 1453-1467.
• Gallais A., Moreau L., Charcosset A. (2007) Detection of marker-QTL associations by studying change in marker frequencies with selective genotyping. Theor Appl Genet, 114 (4): 669-681
• Manicacci, D., Falque, M., Le Guillou, S., Piégu, B., Henry, A.M., Le Guillou, M., Damerval, C. & D. de Vienne (2007). Maize Sh2 gene is constrained by natural selection but escaped domestication. Journal of Evolutionary Biology 20 (2), 503–516.
• Méchin V., Thévenot C., Le Guilloux M., Prioul J.L. and Damerval C. 2007. Developmental analysis of maize endosperm proteome suggests a pivotal role for PPDK in starch/protein balance. Plant Physiol. 143: 1203-1219.
• Moeller A., Tenaillon M.I. and Tiffin P. 2007. Population structure and its effects on patterns of nucleotide polymorphism in teosinte (Zea mays ssp. parviglumis). Genetics 176: 1799-1809.
• Rhoné B., Raquin AL., Goldringer I. (2007) Strong linkage disequilibrium near the selected Yr17 resistance gene in a wheat population under dynamic management. Theor. Appl. Genet. 114:787–802
• Sicard, D., Pennings, P.S., Grandclément, C., Acosta, J., Kaltz, O. and Shykoff, J. A. (2007). Specialization and local adaptation of a fungal parasite on two host species as revealed by two fitness traits. Evolution 61, 27-41.
• Siol M., Bonnin I., Olivieri I., Prosperi J.M. and Ronfort J. (2007). Effective population size associated with self-fertilization: lessons from temporal changes in allele frequencies in the selfing annual Medicago truncatula. Journal of Evolutionary Biology 20: 2349-2360.
• Sumedha, Martin O.C. and Wagner A. (2007), New structural variation in evolutionary searches of RNA neutral networks,BioSystems 90: 475-485.
• Sumedha, Martin O.C. and Peliti L. (2007) Population size effects in evolutionary dynamics on neutral networks and toy landscapes, J. Stat. Mech. P05011.
• Thuillet A-C., Tenaillon M.I., Anderson L.K., Mitchell S.E., Kresovich S., Stack S.M., Gaut B.S. and Doebley J (2007). A weak effect of background selection on trinucleotide microsatellites in maize. Journal of Heredity. 99(1): 45-55
• Veyrieras, J.B., Goffinet B., and Charcosset A. (2007) MetaQTL: a package of new computational methods for the meta-analysis of QTL mapping experiments. BMC Bioinformatics 8(1):49.
• Vincent, D., Ergül, A., Bohlman, M. C., Tattersall, E. A. R., Tillett, R. L., Wheatley, M. D., Woolsey, R., Quilici, D. R., Joets, J., Schlauch, K., Schooley, D. A., Cushman, J. C., Cramer, G. R. (2007) Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity. J Exp Bot, 58 1873–1892.

2006

• Albertin W., Balliau T., Brabant P., Chèvre A.-M., Eber F., Malosse C. & Thiellement H. (2006). Numerous and Rapid Nonstochastic Modifications of Gene Products in Newly Synthesized Brassica napus Allotetraploids. Genetics 173, 1101- 1113.
• Bernardo R., Charcosset A. (2006) Usefulness of Gene Information in Marker-Assisted Recurrent Selection: A Simulation Appraisal. Crop Science 46:614-621
• Bernardo, R., L. Moreau, and A. Charcosset. (2006) Number and Fitness of Selected Individuals in Marker-Assisted and Phenotypic Recurrent Selection. Crop Sci 46:1972-1980.
• Blanc, G., Charcosset A., Mangin B., Gallais A., Moreau L. (2006) Connected populations for detecting quantitative trait loci and testing for epistasis: an application in maize. Theoretical and Applied Genetics 113:206-224.
• Bordes, J., Charmet, G., Dumas de Vaulx, R., Pollacsek, M., Beckert, M., Gallais, A. (2006). Doubled haploid versus S1 family recurrent selection for testcross performance in a maize population. Theor. Appl. Genet. 112, 1063-1072.
• Camus-kulandaivelu, L., Veyrieras, J.-B., Madur, D., Combes, L., Fourmann, M., Barraud, S., Dubreuil, P., Gouesnard, B., Manicacci, D., Charcosset, A. (2006). Maize Adaptation to Temperate Climate: Relationship Between Population Structure and Polymorphism in the Dwarf8 Gene. Genetics 172, 2449-2463.
• Coque, M., Bertin, P., Hirel, B., Gallais, A. (2006). Genetic variation and QTLs for 15N natural abundance in a set of maize recombinant inbred lines. Field crops Res. 97, 310-321.
• Coque, M., Gallais, A. (2006). Genomic regions involved in response to grain yield selection at high and low nitrogen fertilization in maize. Theor. Appl. Genet. 112, 1205-1220.
• Dubreuil P., Warburton M., Chastanet M., Hoisington D., Charcosset A. (2006) More on the introduction of temperate maize into Europe: large-scale bulk SSR genotyping and new historical elements Maydica 51:281-291 Don Duvick issue, soumis sur invitation
• Edelist, C., Lexer, C., Dillmann, C., Sicard, D. and Rieseberg, L.H. (2006). Microsatellite signature of ecological selection for salt tolerance in a wild sunflower hybrid species, Helianthus paradoxus. Mol. Ecol. 15, 4623-4634.
• Fiévet, J., Dillman, C., Curien, G., de Vienne, D. (2006). Simplified modelling of metabolic pathways for flux prediction and optimization: lessons from an in vitro reconstruction of the upper part of glycolysis. Biochem. J. 396, 317-326.
• Gallais, A., Coque, M., Quillère, I., Prioul, J.-L., Hirel, B. (2006). Modelling postsilking nitrogen fluxes in maize (Zea mays) using 15N-labelling field experiments. New Phytol. 172-4, 696-707.
• Goldringer, I., Prouin, C., Rousset, M., Galic, N., Bonnin, I. (2006). Rapid Differentiation of Experimental Populations of Wheat for Heading Time in Response to Local Climatic Conditions. Ann. Bot. London 98, 805-817.
• Hirel, B., Gallais, A. (2006). Rubisco synthesis, turnover and degradation: some new thoughts on an old problem. New Phytol. 169, 445-448.
• Loywyck, V., Pinard-Van der laan, M. E., Goldringer, I., Verrier, E. (2006). On the need for combining complementary analyses to assess the effect of a candidate gene and the evolution of its polymorphism: the example of the major histocompatibility complex in chicken. Genet. Res. 87, 125-131.
• Martin, A., J. Lee, T. Kichey, D. Gerentes, M. Zivy, C. Tatout, F. Dubois, T. Balliau, B. Valot, M. Davanture, T. Terce-Laforgue, I. Quillere, M. Coque, A. Gallais, M.B. Gonzalez-Moro, L. Bethencourt, D.Z. Habash, P.J. Lea, A. Charcosset, P. Perez, A. Murigneux, H. Sakakibara, K.J. Edwards, and B. Hirel. (2006). Two cytosolic glutamine synthetase isoforms of maize are specifically involved in the control of grain production. Plant Cell 18:3252-3274.
• Martin, O., Hospital, F. (2006). Two- and Three-Locus Tests for Linkage Analysis Using Recombinant Inbred Lines. Genetics 173, 451-459.
• Pauwels M., Frérot H., Bonnin I. and Saumitou-Laprade P. (2006). A broad-scale analysis of population differentiation for Zn-tolerance in an emerging model species for tolerance study : A. halleri (Brassicaceae). Journal of Evolutionary Biology 19: 1838-1850.
• Pommel, B., Gallais, A., Coque, M., Quillère, I., Hirel, B., Prioul, J.-L., Andrieu, B. (2006). Carbon and Nitrogen allocation and grain filling in three maize hybrids differing in leaf senescence. Europ. J. Agronomy 24, 203-211.

2005

• Albertin, W., Brabant, P., Catrice, O., Eber, F., Jenczewski (ou y), E., Chèvre, A.-M. and Thiellement, H. (2005). Autopolyploidy in cabbage (Brassica Oleracea L.) does not alter significantly the proteome of green tissues. Proteomics 5, 2131-2139.
• Alix, K., Ryder, C.D., Moore, J., King, G.J., Heslop-Harrison, J.S. (2005). The Genomic Organization of Retrotransposons in Brassica oleracea. Plant Mol. Biol. 59, 839-851.
• Charcosset A. (2005) Marker Assisted Selection in Breeding Hybrid Crops. Encyclopaedia of Plant and Crop Sci. : 1-4.
• Chardon, F. and Damerval, C. (2005). Phylogenomic analysis of the PEBP gene family in Cereals. J. mol. evol. 61, 579-590.
• Chardon, F., Hourcade, D., Combes, V. and Charcosset, A. (2005) Mapping of a spontaneous mutation for early flowering time in maize highlights contrasting allelic series at two-linked QTL on chromosome 8. Theor. Appl. Genet. 112, 1-11.
• Coursol, S., Le Stunff, H., Lynch, D. V., Gilroy, S., Assmann, S. M., Spiegel, S. Arabidopsis sphingosine kinase and the effects of phytosphingosine-1-phosphate on stomatal aperture. Plant Physiol. 137, 724-737.
• Ducruet J.M., Roman M., Havaux M., Janda T., Gallais A. (2004). Cyclic electron flow around PSI monitored by afterglow luminescence in leaves of maize inbred lines (Zea mays L.). Correlation with chilling tolerance. Planta. 221, 567-579.
• Falque, M. (2005). IRILmap: linkage map distance correction for intermated recombinant inbred lines/advanced recombinant inbred strains. Bioinformatics 21, 3441-3442.
• Falque, M., Décousset, L., Dervins, D., Jacob, AM., Joets, J., Martinant, J.P., Raffoux, X., Ribière, N., Ridel, C., Samson, D., Charcosset, A., Murigneux, A. (2005). Linkage mapping of 1454 new maize candidate gene Loci. Genetics 170, 1957-1966.
• Ferry-Dumazet, H., Houel, G., Montalent, P., Moreau, Luc, Langella, O., Vincent, D., Lalanne, C., de Daruvar, A., Plomion, C., Zivy, M. and Joets, J. (2004). PROTICdb : A web-based application to store, track, query, and compare plant proteome data. Proteomics 5,2069-2081.
• Gallais, A., Coque, M. (2005). Genetic variation and selection for nitrogen use efficiency in maize: a synthesis. Maydica 50, 531-547.
• Gouesnard B., Dallard J., Bertin P., Boyat A., Charcosset A.(2005) European maize landraces: genetic diversity, core collection definition and methodology of use. Maydica, 50:225-234, 50^th anniversary issue, soumis sur invitation
• Henry, A.M., D. Manicacci, M. Falque & C. Damerval (2005). Modular evolution in the Opaque-2 gene in Zea mays L. J. Mol. Evol 61: 551-558.
• Hospital, F. Selection in backcross programmes. Philos. T. Roy. Soc. B. 360 (1459), 1503-1511.
• Pauwels, M., Saumitou-Laprade, P., Holl, A.C., Petit, D., Bonnin, I. (2005). Multiple origin of metallicolous populations of the pseudometallophyte arabidopsis halleri (Brassicaceae) in central Europe: the cpDNA testimony. Mol. Ecol. 14, 4403-4414.
• Servin B. (2005). Using markers to reduce the variation in the genomic composition in marker assisted backcrossing. Genet. Res. 85, 151-157
• Vincent, D., Lapierre, C., Pollet, B., Cornic, G., Negroni, L. and Zivy M. (2004). Water deficits affect caffeate O-methyltransferase, lignification and related enzymes in maize leaves : a proteomic investigation. Plant Physiol. 137, 949-960.
• Wall, E., Visscher, PM., Hospital, F., Woolliams, JA. (2005). Genomic contributions in livestock gene introgression programmes. Genet. Sel. Evol. 37, 291-313.
• Welcker, C., Thé, C., Andréau, B., De Leon, C., Parentoni, S. N., Bernal, J., Félicité, J., Zonkeng, C., Salazar, F., Narro, L., Charcosset, A., Horst, W. J. (2005). Heterosis and combining ability for maize adaptation to tropical acid soils: implications for future breeding stategies. Crop Sci. 45, 2405-2413.
• Yamasaki, M., Tenaillon, M. I., Vroh BI, I., Schroeder, S. G., Sanchez-Villeda, H., Doebley, J.F., Gaut, B. S., McMullen, M. D. (2005). A Large-Scale Screen for Artificial Selection in Maize Identifies Candidate Agronomic Loci for Domestication and Crop Improvement. Plant Cell 17, 2859-2872.
• *Coursol S, Le Stunff H, Lynch DV, Gilroy S, Assmann SM, Spiegel S (2005) Arabidopsis sphingosine kinase and the effects of phytosphingosine-1-phosphate on stomatal aperture. Plant Physiol. 137(2):724-37.
• *Ressayre, A., Dreyer, L., Triky-Teurtroy, S., Forchioni S. and Nadot, S. (2005). Post-meiotic cytokinesis and pollen aperture ontogeny : comparison of development in for species differing in aperture pattern. Am. J. Bot. 92: 576-583
• *Sicard,D., Nanni, L., and Porfiri, O., Bulfon, D. and Papa, R. (2005). Genetic diversity of Phaseolus vulgaris L. and P. coccineus landraces in central Italy. Plant Breeding 124, 464-472.

2004

• Arcade, A., Labourdette, A., Falque, M., Mangin, B., Chardon, F., Charcosset, A. and Joets, J. (2004). BioMercator : integrating genetic maps and QTL towards discovery of candidate genes. Bioinformatics 20(14), 2324-2326.
• Azevedo, R.A., Damerval, C., Lea P.J., Landry, J., Bellato, C.M., Meinhardt, L.W., Le Guilloux, M., Delhaye, S., Toro A.A., Gaziola, S.A., Varisi, V.A. and Gratão,P.L. (2004). Genetic control of lysine metabolism in maize endosperm mutants. Functional plant biology 31, 339-348.
• Azevedo, R.A., Lea P.J., Damerval, C., Landry, J., Bellato, C.M., Meinhardt, L.W., Le Guilloux, M., Delhaye, S., Varisi, V.A. Gaziola, S.A., Gratão,P.L. and Toro A.A., (2004). Regulation of lysine metabolism and endosperm protein synthesis by the opaque-5 and opaque-7 maize mutations. J. Agr. Food Chem. 52, 4865-4871.
• Bahrman N., Le Gouis J., Negroni L., Amilhat L., Leroy P., Lainé A.-L. and Jaminon O. (2003). Differential protein expression assessed by two-dimensional gel electrophoresis for two wheat varieties grown at four nitrogen levels. Proteomics 4, 709-719.
• Bahrman, N., Négroni, L., Jaminon, O. and Le Gouis, J. (2004). Wheat leaf proteome analysis using sequence data of proteins separated by two-dimensional electrophoresis. Proteomics 4, 2672-2684.
• Barrière, Y., Emile, J.C., Traineau, R., Surault, F., Briand, M. and Gallais, A. (2004). Genetic variation for organic matter and cell wall digestibility in silage maize. Lessons from a 34-year long experiment with sheep in digestibility crates. Maydica 49-2, 115-126.
• Charcosset A. and Moreau L. (2004). Use of molecular markers for the development of new cultivars and the evaluation of genetic diversity. Euphytica 137, 81-94.
• Chardon, F., Virlon, B., Moreau, L., Falque, M., Joets, J., Decousset, L., Murigneux, A., and Charcosset, A. (2004). Genetic architecture of flowering time in maize as inferred from QTL meta-analysis and synteny conservation with rice genome Genetics 168 : 2169-2185.
• Crepieux, S., Lebreton, C., .Servin, B. and Charmet, G. (2004). Quantitative Trait Loci (QTL) Detection in Multicross Inbred Designs: Recovering QTL Identical-by-Descent Status Information From Marker Data Genetics 168: 1737-1749 .
• Degen, T., Dillmann, D., Marion-Poll, F. and Turnings, T. (2004). High genetic variability of herbivore-induced volatile emission within a broad range of maize inbred lines. Plant Physiol. 135, 1928-1938.
• Fiévet, J., Dillmann, C., Lagniel, G., Davanture, M., Négroni, L., Labarre, J. and de Vienne, D. (2004). Assessing factors for reliable quantitative proteomics based on two-dimensional gel electrophoresis. Proteomics 4, 1939-1949.
• Gallais, A. and Hirel, B. (2004). An approach of the genetics of nitrogen use efficiency in maize. J. Exp. Bot. 55, 295-306.
• Goldringer, I. and Bataillon, T. (2004). On the distribution of temporal variations in allele frequency : consequences for the estimation of effective population size and the detection of loci undergoing selection. Genetics 168, 563-568.
• Guillet-Claude, C., Birolleau-Touchard, C., Manicacci, D., Fourmann, M., Barraud, S., Carret, V., Martinant, J.P., Barrière, Y. (2004). Genetic diversity associated with variation in silage corn digestibility for three O-methyltransferase genes involved in lignin biosynthesis. Theor. Appl. Genet. 110(1):126-35.
• Guillet-Claude, C., Birolleau-Touchard, C., Manicacci, D., Rogowsky, P.M., Rigau, J., Murigneux, A., Martinant, J.P. and Barrière, Y. (2004). Nucleotide diversity of the ZmPox3 maize peroxidase gene : relationships between a MITE insertion in exon 2 and variation in forage maize digestibility. BMC Genet. 5-19.
• Hanocq, E., Niarquin, M., Rousset, M., Charmet, G., and Le Gouis, J. (2004). Detection and mapping of QTL for earliness constituents in a bread wheat recombinant inbred lines population. Theor. Appl. Genet. 110, 106-115.
• Jolivet, P., Roux, E., d'Andrea, S., Davanture, M., Negroni, L., Zivy, M. and Chardot, T., Protein composition of oil bodies in Arabidopsis thaliana ecotype WS. Plant Physiol. and Bioch. 42, 501-509.
• Lecomte, L., Duffé, P., Buret, M., Hospital, F. and Causse, M. (2004). Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds. Theor. Appl. Genet. 109, 658-668.
• Lion, S., Gabriel, F., Bost, B., Fiévet, J., Dillmann, C. and de Vienne, D. (2004). Taking into account correlations between enzymes : an extension to metabolic control theory. Eur. J. Biochem., 271, 4375-4391.
• Massonneau, A., Houba-Hérin, N., Pethe, C., Madzak, C., Falque, M., Mercy, M., Kopecny, D., Majira, A., Rogowsky, P. and Laloue, M. (2004). Maize cytokinin oxidase genes: differential expression and cloning of two new cDNAs. J. Exp. Bot.. 55(408), 2549-2557.
• Méchin, V., Balliau, T., Château-Joubert, S., Davanture, M., Langella, O., Négroni, L., Prioul, J.-L., Thévenot, C., Zivy, M. and Damerval, C. (2004). A two dimensional proteome map of maize endosperm. Phytochemistry 65, 1609-1618.
• Moreau L., Charcosset A. and Gallais, A. (2004). Use of trial clustering to study QTL x environment effects for grain yield and related traits in maize. Theor. Appl. Genet. 110(1):92-105.
• Porcher, E., Giraud, T., Goldringer, I. and Lavigne, C. (2004). Experimental demonstration of a causal relationship between heterogeneity of selection and genetic differentiation in quantitative traits. Evolution 58, 1434-1445.
• Riccardi, F., Gazeau, P., Jacquemot, M.-P., Vincent, D. and Zivy, M. (2004). Deciphering genetic variations of proteome responses to water deficit in maize leaves.Plant Physiol. Bioch. 42, 1003-1011.
• Schiltz, S., Gallardo, K., Huart, M., Negroni, L., Sommerer, N. and Burstin, J. (2004). Proteome reference maps of vegetative tissues in Pea. An investigation of nitrogen mobilization from leaves during seed filling. Plant Physiol. 135, 2241-2260.
• Servin, B., Martin, O. C., Mezard, M. and Hospital, F. (2004). Towards a theory of marker assisted gene pyramiding. Genetics 168, 513-523.
• Tenaillon, M. I., U'ren, J., Tenaillon, O. and Gaut, B. S. (2004). Selection versus demography : a multilocus investigation of the domestication process in maize. Mol. Biol. Evol. 21, 1214-1225.
• Thabuis, A., Palloix, A., Servin, B., Daubèze, A.M., Signoret, P., Hospital, F. and Lefebvre, V. (2004). Marker-assisted introgression of 4 Phytophthora capsici resistance QTL alleles into a bell pepper line : validation of additive and epistatic effects. Mol. Breeding 14(1), 9-20.
• Trouverie, J., Chateau-Joubert, S., Thévenot, C., Jacquemot, M.-P. and Prioul, J.-L. (2004). Regulation of vacuolar invertase by abscisic acid or glucose in leaves and roots from maize plantlets. Planta 219, 894-905.
• Van Rossum, F., Bonnin, I., Fénart, S., Pauwels, M., Petit, D. and Saumitou-Laprade, P. (2004). Spatial genetic structure within a metallicolous population of Arabidopsis halleri, a clonal, self-incompatible and heavy-metal-tolerant species. Mol. Ecol. 13, 2959-2967.
• *Alix, K., Heslop-Harrison, J.S. (2004). The diversity of retroelements in diploid and allotetraploid Brassica species. Plant Mol. Biol. 54, 895-909.
• *Jenczewski, E., Alix, K. (2004). From diploids to allopolyploids: the emergence of efficient pairing control genes in plants. Crit. Rev. Plant. Sci. 23, 21-45.
• *Osuna, L., Coursol, S., Pierre, J.-N. and Vidal, J. (2004). A Ca(2+)-dependent protein kinase with characteristics of protein kinase C in leaves and mesophyll cell protoplasts from Digitaria sanguinalis : possible involvement in the C(4)-phosphoenolpyruvate carboxylase phosphorylation cascade. Biochem. Bioph. Res. Co.314, 428-433.
• *Vasut, R.J., Van Dijk, P.J., Falque, M., Travnicek, B. and De Jong, J.H. (2004). Development and characterization of nine microsatellite markers in Taraxacum (Asteraceae). Mol. Ecol. 4, 645-648.
• *Pennet, L., Nadot, S., Ressayre, A., Forchioni S., Dreyer, L. and Gouyon, P.- H. (2004) Multiple developmental pathways leading to a single morph : monosulcate pollen (examples from the Asparagales). Ann. Bot. London 95(2):331-43.
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2003

• Albini, G., Falque M. and Joets, J. (2003). ActionMap : a web-based software that automates loci assignments to framework maps. Nucleic Acids Res. 31, 3815-3818.
• Azevedo R.A., Damerval C., Landry J., Lea P.J., Bellato C.M., Meinhardt L.W., Le Guilloux M., Delhaye S., Toro A.A., Gaziola S.A. and Berdejo B.D.A. (2003). Regulation of maize lysine metabolism and endosperm protein synthesis by opaque and floury mutations. Eur. J. Biochem. 270, 4898-1908.
• Damerval, C. and Manuel, M. (2003). Independent evolution of CYCLOIDEA-like sequences in angiosperm taxa. C. R. Palévol 2, 241-250.
• Dubois, F., Terce-Laforgue, T., Gonzales-Moro, M.B., Estavillo J.M., Sangwan R., Gallais A. and Hirel, B. (2003). Glutamate dehydrogenase in plants : is there a new story for an old enzyme ? Plant Physiol. Bioch. 41, 565-576.
• Landry, J., Delhaye, S. and Damerval, C. (2003). Protein distribution pattern in floury and vitreous endosperm of maize grain. Cereal Chem. 81,153-158.
• Méchin, V., Consoli, L., Le Guilloux, M. and Damerval, C. (2003). An efficient solubilization buffer for plant proteins focused in immobilized pH gradients. Proteomics 3 , 1299-1302.
• Moreau, L., Charcosset, A. and Gallais, A. (2003). Experimental evaluation of several cycles of marker-assisted selection in maize. Euphytica 137, 111-118.
• Quemener B., Desire C., Lahaye M., Debrauwer L. and Negroni L. (2003). Structural characterisation by both positive- and negative-ion electrospray mass spectrometry of partially methyl-esterified oligogalacturonides purified by semi-preparative high-performance anion-exchange chromatography. Eur. J. Mass. Spectrom. 9, 45-60.
• Rebourg, C., Chastanet, M., Gouesnard, B., Welcker, C., Dubreuil, P. and Charcosset, A. (2003). Maize introduction in Europe : The history reviewed in the light of molecular data. Theor. Appl. Genet. 106, 895-903.
• Reymond, M., Muller, B., Leonardi, A., Charcosset, A., and Tardieu, F. (2003). Combining Quantitative Trait Loci Analysis and an Ecophysiological Model to Analyze the Genetic Variability of the Responses of Maize Leaf Growth to Temperature and Water Deficit. Plant Physiol. 131, 664-675.
• *Coursol, S., Fan, L.-M., Le Stunff, H., Spiegel, S., Gilroy, S. and Assmann, S.M. (2003). Sphingolipid signalling in Arabidopsis guard cells involves heterotrimeric G proteins. Nature 423, 651-654.
• *Ressayre, A., Mignot, A., Yakovlev, S. and Raquin, C. (2003). Postmeiotic cytokinesis and pollen aperture number determination in eudicots : effect of the cleavage wall number. Protoplasma 221, 257-268.
• *Sicard, D., Legg, E., Brown, S., Babu, N.K., Ochoa, O. and Michelmore, R.W. (2003). A genetic map of the lettuce downy mildew pathogen, Bremia lactucae, constructed from molecular markers and avirulence genes. Fungal Genet. Biol. 39 , 16-30.
• *Van Der Hulst, R.G.M., Mes, T.H.M., Falque, M. Stam, P., Den Nijs, J.C.M., & Bachmann, K. (2003) Genetic structure of a population sample of apomictic dandelions. Heredity 90, 326–335

2002

• Bianchi, M., Damerval, C. and Vartanian, N. (2002). Identification of proteins regulated by cross-talk between drought and hormone pathways in Arabidopsis wild-type and auxin-insensitive mutants axr1 and axr2. Functional Plant Biology 29, 55-61.
• Bouchez, A., Hospital, F., Causse, M., Gallais, A. and Charcosset, A. (2002). Marker assisted introgression of favorable alleles at quantitative trait loci between maize elite lines. Genetics 162, 1945-1959.
• Chakraborty, R., Moreau, L. and Dekkers, J.C.M. (2002). A general method to optimize selection on multiple identified trait loci. Genet. Sel. Evol. 34, 145-170.
• Consoli, L., Lefèvre, A., Zivy, M., de Vienne, D. and Damerval, C. (2002). QTL analysis of transcriptome and proteome variations for dissecting the genetic architecture of complex traits in maize. Plant Mol. Biol. 48, 575-581.
Dekkers, J.C.M., and Hospital, F. (2002). The use of molecular genetics in the improvement of agricultural populations. Nat. Rev. Genet. 3, 22-32.
• Dekkers, J.C.M., Chakraborty, R., and Moreau, L. (2002). Optimal selection on multiple identified quantitative trait loci. Genet. Sel. Evol. 34, 171-192.
• Gauthier, P., Gouesnard, B., Dallard, J., Redaelli, R., Rebourg, C., Charcosset, A. and Boyat, A. (2002). RFLP diversity and relationships among traditional European maize populations. Theor. Appl. Genet.105, 91-99.
• Gouesnard, B., Rebourg, C., Welcker, C. and Charcosset, A. (2002). Analysis of photoperiod sensitivity within a collection of tropical maize populations. Genet. Resour. Crop Ev. 49, 471-481.
• Hospital, F. and Decoux, G. (2002). Popmin : A Program for the Numerical Optimization of Population Sizes in Marker-Assisted Backcross Programs. J. Hered. 93, 383-384.
• Jeanneau, M., Gerentes, D., Fouillassard, X., Zivy, M., Vidal, J., Toppan, A. and Perez, P. (2002). Improvement of drought tolerance in maize : towards the functional validation of the Zm-Asr1 gene and increase of water use efficiency by over-expressing C4-PEPC. Biochimie 84, 1127-1135.
• Landry, J., Delhaye, S. and Damerval, C. (2002). Effect of the opaque-2 gene on accumulation of protein fractions in maize endosperm. Maydica 47, 59-66.
• Landry, J., Delhaye, S. and Damerval, C. (2002). Comparative efficiencies of isopropyl and tert-butyl alcohols for extracting zeins from maize endosperm. J. Agr. Food Chem. 50, 4131-4134.
• Lefèvre, A., Consoli, L., Gaziola, S.A., Pellegrino, A.P., Azevedo, R.A. and Damerval, C. (2002). Dissecting the Opaque-2 regulatory network using transcriptome and proteome approaches along with enzyme activity measurements. Scientia Agricola 59, 407-414.
Limami, A.M., Rouillon, C., Glevarec, G., Gallais, A. and Hirel, B. (2002). Genetic and physiological analysis of germination efficiency in maize in relation to nitrogen metabolism reveals the importance of cytosolic glutamine synthetase. Plant Physiol. 130, 1860-1870.
• Servin, B. and Hospital, F. (2002). Optimal Positioning of Markers to Control Genetic Background in Marker-Assisted Backcrossing. J. Hered. 93, 214-217.
• Servin, B., Dillmann, C., Decoux, G. and Hospital, F. (2002). MDM : a program to compute fully informative genotype frequencies in complex breeding schemes. J. Hered. 93, 227-228.
• Thiellement, H., Zivy, M. and Plomion, C. (2002). Combining proteomic and genetic studies in plants. J. Chromatogr. B. 782, 137-149.
• *Barrière, Y., Gibelin, C., Argillier, O. and Méchin, V. (2002). Genetic analysis in recombinant inbred lines of early dent forage maize. I- QTL mapping for yield, earliness, starch and crude protein contents from per se value and top cross experiments. Maydica 46, 253-266.
• *Bert, V., Bonnin, I., Saumitou-Laprade, P., de Laguérie, P. and Petit, D. (2002). Do Arabidopsis halleri from nonmetallicolous populations accumulate Zinc and Cadmium more effectively than those from metallicolous populations New phytol. 155, 47-57.
• *Bonnin, I., Colas, B., Bacles, C., Holl, A.C., Hendoux, F., Destiné, B. and Viard, F. (2002). Population structure of an endangered species living in contrasted habitats : Parnassia palustris (Saxifragaceae). Mol. Ecol. 11, 979-990.
• *Clement G, Boquet D, Frobert Y, Bernard H, Negroni L, Chatel JM, Adel-Patient K, Creminon C, Wal JM and Grassi J. (2002). Epitopic characterization of native bovine beta-lactoglobulin. J. Immunol. Methods 266, 67-78.
• *Coursol, S., Pierre, J.-N., Vidal, J. and Grisvard, J. (2002). Cloning and characterization of a phospholipase C from the C4 plant Digitaria sanguinalis. J. Exp. Bot. 53, 1521-1524.
• *Fourmann, M., Barret, P., Froger, N., Baron, C., Charlot, F., Delourme, R. and Brunel, D. (2002). From Arabidopsis thaliana to Brassica napus : development of amplified consensus genetic markers (ACGM) for construction of a gene map. Theor. Appl. Genet. 105, 1196-1206.
• *Pandey, S., Wang, X.-Q. and Coursol, S. (2002). Preparation and applications of Arabidopsis thaliana guard cell protoplasts. New phytol. 153, 517-526.
• *Ressayre, A., Raquin, C., Mignot, A., Godelle, B. and Gouyon, P.-H. (2002). Correlated variation in microtubule distribution, callose deposition during male post-meiotic cytokinesis, and pollen aperture number across Nicotiana species (Solanaceae). Am. J. Bot. 89, 393-400.
• *Ressayre, A., Godelle, B., Raquin, C.and Gouyon, P.-H. (2002). Aperture pattern ontogeny in Angiosperms. J. Exp. Zool. 294, 122-135.
• *Tenaillon, M.I., Sawkins, M.C., Anderson, L.K., Stack, S.M., Doebley , J. and Gaut, B.S. (2002). Patterns of diversity and recombination along chromosome 1 of maize (Zea mays ssp. mays L.). Genetics 162, 1401-1413.
• *Whitt, S.R., Wilson, L.M., Tenaillon, M.I., Gaut, B.S., and Buckler, E.S. 4th. (2002). Genetic diversity and selection in the maize starch pathway. Proc. Natl. Acad. Sci. U.S.A. 99, 12959-12962.

2001

• Andalo, C., Goldringer, I. and Godelle, B. (2001). Inter- and intragenotypic competition under elevated carbon dioxin in Arabidopsis thaliana. Ecology 82, 157-164.
• Bertin, P., and Gallais, A. (2001). Genetic variation for nitrogen use efficiency in a set of recombinant inbred lines. II QTL detection and coincidences. Maydica 46, 53-68.
• Bost, B., de Vienne, D., Moreau, L., Hospital, F. and Dillmann, C. (2001). Genetic and non genetic bases for the L-shaped distribution of QTL effects. Genetics 157, 1773-1787.
• Consoli, L. and Damerval, C. (2001). Quantification of individual zein isoforms resolved by two-dimensional electrophoresis : genetic variability in 45 maize inbred lines. Electrophoresis 22, 2983-2989.
• de Vienne, D., Bost, B., Fiévet, J. and Dillmann, C. (2001). Optimization of enzyme concentrations for unbranched reaction chains : the concept of combined response coefficient. Acta Biotheoretica 49, 341-350.
• de Vienne, D., Bost, B., Fiévet, J., Zivy, M. and Dillmann, C. (2001). Genetic variability of proteome expression and metabolic control. Plant Physiol. Bioch. 39, 271-283.
• Epinat-Le Signor, C., Dousse, S., Lorgeou, J., Denis, J.-B., Bonhomme, R., Carolo, P. and Charcosset, A. (2001). Interpretation of genotype x environment interactions for early maize hybrids over 12 years. Crop Sci. 41, 663-669.
• Goldringer, I., Enjalbert, J., Raquin, A.-L. and Brabant, P. (2001). Strong selection in wheat populations during ten generations of dynamic management. Genet. Sel. Evol. 33, 441-463.
• Hirel, B., Bertin, P., Quilleré, I., Bourdoncle, W., Attagnant, C., Dellay, C., Gouy, A., Cadiou, S., Retailliau, C., Falque, M. and Gallais, A. (2001). Towards a better understanding of the genetic and physiological basis for nitrogen use efficiency in maize. Plant Physiol. 125, 1258-1270.
• Hospital, F. (2001). Size of donor chromosome segments around introgressed loci and reduction of linkage drag in marker-assisted backcross programs. Genetics 158, 1363-1379.
• Marquès, K., Sarazin, B., Chané-Favre, L., Zivy, M. and Thiellement, H. (2001). Comparative proteomics to establish genetic relationships in the Brassicaceae family. Proteomics 1, 1457-1462.
• Masclaux, C., Quillère, I., Gallais, A., and Hirel, B. (2001). The challenge of remobilization in plant nitrogen economy. A survey of physio-agronomic and molecular approaches. Ann. Appl. Biol. 138, 69-81.
• Méchin, V., Argillier, O., Hébert, Y., Guingo, E., Moreau, L., Charcosset, A., and Barrière, Y. (2001). Genetic analysis and QTL mapping of cell wall digestibility and lignification in silage maize. Crop Sci. 41, 690-697.
• Rebourg, C., Gouesnard, B., and Charcosset, A. (2001). Large scale molecular analysis of traditional European maize populations. Relationships with morphological variation. Heredity 86, 574-587.
• Roldan-Ruiz, I., Van Euwijk, F.A., Gilliland, T.J., Dubreuil, P., Dillmann, C., Lallemand, J., de Loose, M. and Baril, C. (2001). A comparative study of molecular and morphological methods of describing relationships between perennial ryegrass (Lolium perenne L.) varieties. Theor. Appl. Genet. 103, 1138-1150.
• Rousset, M., Brabant, P., Kota, R.S., Dubcovsky, J. and Dvorak, J. (2001). Use of recombinant substitution lines for gene mapping and QTL analysis of bread making quality in wheat. Euphytica 119, 81-87.
• *Benavente, E., Alix, K., Dusautoir, J.-C., Orellana, J., David, J.L. (2001). Early evolution of the chromosomal structure of Triticum turgidum - Aegilops ovata amphiploids carrying and lacking the Ph1 gene. Theor. Appl. Genet. 103, 1123-1128.
• *Bonnin, I., Ronfort, J., Wozniak, F. and Olivieri, I. (2001). Spatial effects and rare outcrossing events in Medicago truncatula (Fabaceae ). Mol. Ecol. 10, 1371-1383.
• *Fourmann, M., Charlot, F., Froger, N., Delourme, D., and Brunel, D. (2001). Expression, mapping and genetic variability of Brassica napus disease resistance gene analogues. Genome 44, 1083-1099.
• *Manicacci, D. and Després, L. (2001). Male and hermaphrodite flowers in the alpine lily Lloydia serotina. Can. J. Bot. 79, 1107-1114.
• *Ressayre, A. (2001). Equatorial aperture pattern in monocots : same definition rules as in eudicots ? The example of two species of Pontederiaceae. Int. J. Plant Sci. 162, 1219-1224.
• *Sarazin, B., Marquès, K., Chané-Favre, L., Greppin, H. and Thiellement, H. (2001). Détermination des paramètres permettant l'induction florale chez Arabidopsis thaliana par la lumière ou l'acide gibbérellique. Arch. Sci. 54, 77-82.
• *Tenaillon, M.I., Sawkins, M.C., Long, A.D., Gaut, R.L., Doebley, J.F. and Gaut, B.S. (2001). Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp.mays L.). Proc. Natl. Acad. Sci. U. S. A. 98, 9161-9166.
• *Vandenkoornhuyse, P., Leyva, C. and Bonnin, l. (2001). High genetic diversity in Arbuscular Mycorrhizal fungi : evidence for recombination events. Heredity 87, 243-253.