French (Fr)English (United Kingdom)
 

No translation found

portrait d'Olivier LangellaOlivier LANGELLA

______________________________________

Génétique Quantitative et Évolution - Le Moulon
INRA - Université Paris-Sud - CNRS – AgroParisTech
Ferme du Moulon
Gif-sur Yvette
Phone: + 33 1 69 33 23 68
e-mail : This e-mail address is being protected from spambots. You need JavaScript enabled to view it
Jabber ID : This e-mail address is being protected from spambots. You need JavaScript enabled to view it
ORCID

 

> Position and Education

CNRS research engineer, GQE-Le Moulon (Gif-sur-Yvette, France), 2004-present

CNRS research engineer, EGCE (Gif-sur-Yvette, France), 1996-2003

Bioinformatics post graduate degree (Université Pierre et Marie Curie, Paris VI), 1995

 

> Research interests

I am interested in computational challenges raised by highthroughtput proteomics studies (data storage and intensive calculation). In charge of the bioinformatics developments of the PAPPSO team, I thus lead several projects :

- MassChroQ, mass spectrometry based quantification software

- X!TandemPipeline, for protein inference

- PROTICdb, proteomic database to store, publish and query proteomics data

We have developped a complete solution using free softwares and common hardware to store 10Tbytes per year and offering high speed connection to an HPC cluster (based on ceph and HTCondor).

I am also involved in the GQE Bioinformatics facility (ABI), in which I lead the ABI-SYS group (system).

 

> Selected publications

  1. Langella O, Valot B, Balliau T, Blein-Nicolas M, Bonhomme  L, Zivy  M (2017)  X!TandemPipeline: A Tool to Manage Sequence Redundancy for Protein Inference and Phosphosite Identification. J Proteome Res, 16, 494–503.
  2. Langella O, Valot  B, Jacob D, Balliau T, Flores R, Hoogland C, Joets J, Zivy M (2013 ) Management and dissemination of MS proteomic data with PROTICdb: Example of a quantitative comparison between methods of protein extraction. PROTEOMICS, 13, 1457–1466.
  3. Langella O, Zivy M (2010) Beads, logiciel de détection de spots sur gel d’électrophorèse 2D. Spectra Analyse, 20–25.
  4. Langella O, Zivy M, Joets J (2007) The PROTICdb database for 2-DE proteomics. Methods Mol Biol, 355, 279–303.

 

> Selected book chapters

Langella O, Zivy M, Joets J (2007) The PROTICdb database for 2-DE proteomics. Methods Mol Biol, 355:279-303.