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Publications d'ACEP

Études du polymorphisme de l'ADN

Études d'expression de gènes

Cartographie génétique et recombinaison

Novembre 2018

♦ Étude du polymorphisme de l'ADN


Thomas M., Thepot S., Galic N., Jouanne-Pin S., Remoue C., Goldringer I. (2015) Diversifying mechanisms in the on-farm evolution of crop mixtures. Mol Ecol, 24 (12) 2937-54.

Durand E., Tenaillon M. I., Raffoux X., Thepot S., Falque M., Jamin P., Bourgais A., Ressayre A., Dillmann C. (2015) Dearth of polymorphism associated with a sustained response to selection for flowering time in maize. BMC Evol Biol, 15 103.


Sarilar V., Palacios P. M., Rousselet A., Ridel C., Falque M., Eber F., Chevre A. M., Joets J., Brabant P., Alix K. (2013) Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids. New Phytol, 198 (2) 593-604.

Gonçalves B., Nougué O., Jabbour F., Ridel C., Morin H., Laufs P., Manicacci D., Damerval C. (2013) An Apetala3 homolog controls both petal identity and floral meristem patterning in Nigella damascena L. (Ranunculaceae). Plant J, 76 (2) 223-35.


Le Gouis J., Bordes J., Ravel C., Heumez E., Faure S., Praud S., Galic N., Remoue C., Balfourier F., Allard V., Rousset M. (2012) Genome-wide association analysis to identify chromosomal regions determining components of earliness in wheat. Theor Appl Genet, 124 (3) 597-611.

Thomas M., Demeulenaere E., Dawson J. C., Khan A. R., Galic N., Jouanne-Pin S., Remoue C., Bonneuil C., Goldringer I. (2012) On-farm dynamic management of genetic diversity: the impact of seed diffusions and seed saving practices on a population-variety of bread wheat. Evol Appl, 5 (8) 779-95.


Rousset M., Bonnin I., Remoue C., Falque M., Rhone B., Veyrieras J. B., Madur D., Murigneux A., Balfourier F., Le Gouis J., Santoni S., Goldringer I. (2011) Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.). Theor Appl Genet, 123 (6) 907-26.


Durand E., Tenaillon M. I., Ridel C., Coubriche D., Jamin P., Jouanne S., Ressayre A., Charcosset A., Dillmann C. (2010) Standing variation and new mutations both contribute to a fast response to selection for flowering time in maize inbreds. BMC Evol Biol, 10 2.


Rhoné B., Remoué C., Galic N., Goldringer I., Bonnin I. (2008) Insight into the genetic bases of climatic adaptation in experimentally evolving wheat populations. Mol Ecol, 17 (3) 930-43.

♦ Études d'expression de gènes


Virlouvet L., Jacquemot M. P., Gerentes D., Corti H., Bouton S., Gilard F., Valot B., Trouverie J., Tcherkez G., Falque M., Damerval C., Rogowsky P., Perez P., Noctor G., Zivy M., Coursol S. (2011) The ZmASR1 protein influences branched-chain amino acid biosynthesis and maintains kernel yield in maize under water-limited conditions. Plant Physiol, 157 (2) 917-36.


Edelist C., Raffoux X., Falque M., Dillmann C., Sicard D., Rieseberg L. H., Karrenberg S. (2009) Differential expression of candidate salt-tolerance genes in the halophyte Helianthus paradoxus and its glycophyte progenitors H. annuus and H. petiolaris (Asteraceae). Am J Bot, 96 (10) 1830-8.

♦ Cartographie génétique et recombinaison


Raffoux X., Bourge M., Dumas F., Martin O. C. and Falque M. (2018) Role of cis, trans, and Inbreeding Effects on Meiotic Recombination in Saccharomyces cerevisiae. Genetics, Epub ahead of print.

Raffoux X., Bourge M., Dumas F., Martin O. C., Falque M. (2018) High throughput measurement of recombination rates and genetic interference in S. cerevisiae. Yeast, 35 (6) 431-442.


Giraud H., Bauland C., Falque M., Madur D., Combes V., Jamin P., Monteil C., Laborde J., Palaffre C., Gaillard A., Blanchard P., Charcosset A., Moreau L. (2017) Reciprocal Genetics: Identifying QTLs for General and Specific Combining Abilities in Hybrids Between Multiparental Populations from Two Maize (Zea mays L.) Heterotic Groups. Genetics, 207 (3) 1167-1180.

Giraud H., Bauland C., Falque M., Madur D., Combes V., Jamin P., Monteil C., Laborde J., Palaffre C., Gaillard A., Blanchard P., Charcosset A., Moreau L. (2017) Linkage Analysis and Association Mapping QTL Detection Models for Hybrids Between Multiparental Populations from Two Heterotic Groups: Application to Biomass Production in Maize (Zea mays L.). G3 (Bethesda), 7 (11) 3649-3657.


Boutet G., Alves Carvalho S., Falque M., Peterlongo P., Lhuillier E., Bouchez O., Lavaud C., Pilet-Nayel M. L., Riviere N., Baranger A. (2016) SNP discovery and genetic mapping using genotyping by sequencing of whole genome genomic DNA from a pea RIL population. BMC Genomics, 17 (1) 121.


Boisnard S., Zhou Li Y., Arnaise S., Sequeira G., Raffoux X., Enache-Angoulvant A., Bolotin-Fukuhara M., Fairhead C. (2015) Efficient Mating-Type Switching in Candida glabrata Induces Cell Death. PLoS One, 10 (10) e0140990.

Sidhu G. K., Fang C., Olson M. A., Falque M., Martin O. C., Pawlowski W. P. (2015) Recombination patterns in maize reveal limits to crossover homeostasis. Proc Natl Acad Sci U S A, 112 (52) 15982-.

Tayeh N., Aluome C., Falque M., Jacquin F., Klein A., Chauveau A., Berard A., Houtin H., Rond C., Kreplak J., Boucherot K., Martin C., Baranger A., Pilet-Nayel M. L., Warkentin T. D., Brunel D., Marget P., Le Paslier M. C., Aubert G., Burstin J. (2015) Development of two major resources for pea genomics: the GenoPea 13.2K SNP Array and a high density, high resolution consensus genetic map. Plant J, 84 (6) 1257-73.


Giraud H., Lehermeier C., Bauer E., Falque M., Segura V., Bauland C., Camisan C., Campo L., Meyer N., Ranc N., Schipprack W., Flament P., Melchinger A. E., Menz M., Moreno-Gonzalez J., Ouzunova M., Charcosset A., Schon C. C., Moreau L. (2014) Linkage Disequilibrium with Linkage Analysis of Multi-Line Crosses Reveals Different Multi-Allelic QTL for Hybrid Performance in the Flint and Dent Heterotic Groups of Maize. Genetics, 198 (4) 1717-34.


Bauer, E., Falque, M., Walter, H., Bauland, C., Camisan, C., Campo, L., Meyer, N., Ranc, N., Rincent, R., Schipprack, W., Altmann, T., Flament, P., Melchinger, A.E., Menz, M., Moreno-González, J., Ouzunova, M., Revilla, P., Charcosset, A., Martin, O.C. &  Schön C.C. (2013) Intraspecific variation of recombination rate in maize. Genome Biol 14:R103.

Drouaud J., Khademian H., Giraut L., Zanni V., Bellalou S., Henderson I. R., Falque M., Mezard C. (2013) Contrasted Patterns of Crossover and Non-crossover at Arabidopsis thaliana Meiotic Recombination Hotspots. PLoS Genet, 9 (11) e1003922.


Ganal, MW, Durstewitz, G., Polley, A., Buckler, E.S., Charcosset, A., Clarke, J.D., Graner, E-M., Hansen, M., Joets, J., McMullen, M.D., Montalent, P., Rose, M., Schön, C-C., Sun, Q., Walter, H., Martin, O.C. and Falque, M. (2011) A Large Maize (Zea mays L.) SNP Genotyping Array: Development and Germplasm Genotyping, and Genetic Mapping to Compare with the B73 Reference PloS ONE, 6 e28334.

Giraut, L*., Falque, M.*, Drouaud, J.,  Pereira, L., Martin, O.C. and  Mézard C. (2011) Genome-wide  crossover distribution in Arabidopsis thaliana meiosis reveals sex specific patterns along chromosomes.  PLoS Genet, 7 (11)  e1002354 * these authors contributed equally to the work.


Capelle V., Remoue C., Moreau L., Reyss A., Mahe A., Massonneau A., Falque M., Charcosset A., Thevenot C., Rogowsky P., Coursol S., Prioul J. L. (2010) QTLs and candidate genes for desiccation and abscisic acid content in maize kernels. BMC Plant Biol, 10 2.

Cassan L., Moreau L., Segouin S., Bellamy A., Falque M., Limami A. M. (2010) Genetic map construction and quantitative trait loci (QTL) mapping for nitrogen use efficiency and its relationship with productivity and quality of the biennial crop Belgian endive (Cichorium intybus L.). J Plant Physiol, 167 (15) 1253-63.