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Publications des membres de ABI



arrow Damerval C., Citerne H., Conde E. S. N., Deveaux Y., Delannoy E., Joets J., Simonnet F., Staedler Y., Schonenberger J., Yansouni J., Le Guilloux M., Sauquet H. and Nadot S. (2019) Unraveling the Developmental and Genetic Mechanisms Underpinning Floral Architecture in Proteaceae. Front Plant Sci, 10 18. doi:10.3389/fpls.2019.00018

arrow Urien C., Legrand J., Montalent P., Casaregola S. and Sicard D. (2019) Fungal Species Diversity in French Bread Sourdoughs Made of Organic Wheat Flour. Front Microbiol, 10 201. doi:10.3389/fmicb.2019.00201



arrow Alaux M., ... Steinbach D., Adam-Blondon A. F., Quesneville H. (2018) Linking the International Wheat Genome Sequencing Consortium bread wheat reference genome sequence to wheat genetic and phenomic data. Genome Biol, 19 (1) 111.


arrow Adam-Blondon A. F., Alaux M., Durand S., Letellier T., Merceron G., Mohellibi N., Pommier C., Steinbach D., Alfama F., Amselem J., Charruaud D., Choisne N., Flores R., Guerche C., Jamilloux V., Kimmel E., Lapalu N., Loaec M., Michotey C., Quesneville H. (2017) Mining Plant Genomic and Genetic Data Using the GnpIS Information System. Methods Mol Biol, 1533 103-117.

arrow Perronne R., Makowksi D., Goffaux R., Montalent P., Goldringer I. (2017) Temporal evolution of varietal, spatial and genetic diversity of bread wheat between 1980 and 2006 strongly depends upon agricultural regions in France. Agriculture, Ecosystems & Environment, 236 12-20.

arrow Richard M. M. S., Gratias A., Thareau V., Kim K. D., Balzergue S., Joets J., Jackson S. A., Geffroy V. (2017) Genomic and epigenomic immunity in common bean: the unusual features of NB-LRR gene family. DNA Res, 25 (2) 161-172.



arrow Ressayre A., Glemin S., Montalent P., Serre-Giardi L., Dillmann C., Joets J. (2015) Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes. Genome Biol Evol, 7 (10) 2913-28.



arrow Bonnin, I., Bonneuil, C., Goffaux, R., Montalent, P., Goldringer, I. (2014) Explaining the decrease in the genetic diversity of wheat in France over the 20th century. Agr Ecosys Env, 195 183-192.

arrow Valente F., Gauthier F., Bardol N., Blanc G., Joets J., Charcosset A., Moreau L. (2014) OptiMAS: A Decision Support Tool to Conduct Marker-Assisted Selection Programs. Methods Mol Biol, 1145 97-116.


arrow Sarilar V., Palacios P.M., Rousselet A., Ridel C., Falque M., Eber F., Chèvre A.M., Joets J., Brabant P., Alix K. (2012) Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids, New Phytol. 2013 Apr;198(2):593-604.

arrow Langella O, Valot B, Jacob D, Balliau T, Flores R, Hoogland C, Joets J, Zivy M(2013) Management and dissemination of MS proteomic data with PROTICdb: example of a quantitative comparison between methods of protein extraction, Proteomics. 2013 May;13(9):1457-66.

arrow Valente F, Gauthier F, Bardol N, Blanc G, Joets J, Charcosset A, Moreau L. (2013) OptiMAS: a decision support tool for marker-assisted assembly of diverse alleles, J Hered. 2013 Jul-Aug;104(4):586-90


arrow Sosnowski O., Charcosset A., Joets J. (2012) BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms. Bioinformatics. 2012 Aug 1;28(15):2082-3.

arrow Bonneuil, C., Goffaux, R., Bonnin, I., Montalent, P., Hamon, C., Balfourier, F. and Goldringer, I. (2012) A new integrative indicator to assess crop genetic diversity. Ecol Indic, 23 280-289.

arrow Vincent D., Kohler A., Claverol S., Solier E., Joets J., Gibon J., Lebrun M.H., Plomion C., Martin F. (2012) Secretome of the free-living mycelium from the ectomycorrhizal basidiomycete Laccaria bicolor, J Proteome Res. 2012 Jan 1;11(1):157-71.


arrow Ganal M.W., Durstewitz G., Polley A., Bérard A., Buckler E.S., Charcosset A., Clarke J.D., Graner E.M., Hansen M., Joets J., Le Paslier M.C., McMullen M.D., Montalent P., Rose M., Schön C.C., Sun Q., Walter H., Martin O.C., Falque M. (2011) A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome, PLoS One. 2011;6(12):e28334.

arrow Sarilar V., Marmagne A., Brabant P., Joets J., Alix K. (2011) BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space, Plant Mol Biol. 2011 Sep;77(1-2):59-75.

arrow Wang S., Spor A., Nidelet T., Montalent P., Dillmann C., de Vienne D., Sicard D. (2011) Changing Glycolytic Genes Dosage Results in a Switch between Life-History Strategies in Saccharomyces cerevisiae, Appl Environ Microbiol., Nov 12.

arrow Corbi J., Debieu M., Rousselet A., Montalent P., Le Guilloux M., Manicacci D., Tenaillon MI. (2011) Contrasted patterns of selection since maize domestication on duplicated genes encoding a starch pathway enzyme, Theor Appl Genet., Nov. 9.


arrow Montalent P. and Joets J. (2010) EuGene-maize: a web site for maize gene prediction, Bioinformatics, 26, 1254-1255.

arrow Hoogland C., O'Gorman M., Bogard P., Gibson F., Berth M., Cockell S.J., Ekefjard A., Forsstrom-Olsson O., Kapferer A., Nilsson M., Martinez-Bartolome S., Albar J.P., Echevarria-Zomeno S., Martinez-Gomariz M., Joets J., Binz P.A., Taylor C.F., Dowsey A. and Jones A.R. (2010)  Guidelines for reporting the use of gel image informatics in proteomics, Nat Biotechnol, 28, 655-656.


arrow Albertin W., Langella O., Joets J., Negroni L., Zivy M., Damerval C. and Thiellement H. (2009) Comparative proteomics of leaf, stem, and root tissues of synthetic Brassica napus, Proteomics, 9, 793-799.

arrow Vincent D., Balesdent M.H., Gibon J., Claverol S., Lapaillerie D., Lomenech A.M., Blaise F., Rouxel T., Martin F., Bonneu M., Amselem J., Dominguez V., Howlett B.J., Wincker P., Joets J., Lebrun M.H. and Plomion C. (2009) Hunting down fungal secretomes using liquid-phase IEF prior to high resolution 2-DE, Electrophoresis, 30, 4118-4136.

arrow Zerjal T., Joets J., Alix K., Grandbastien M.A. and Tenaillon M.I. (2009) Contrasting evolutionary patterns and target specificities among three Tourist-like MITE families in the maize genome, Plant Mol Biol, 71, 99-114.


arrow Alix K., Joets J., Ryder C.D., Moore J., Barker G.C., Bailey J.P., King G.J. and Pat Heslop-Harrison, J.S. (2008) The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation, Plant J, 56, 1030-1044.


arrow Langella O., Zivy M. and Joets J. (2007) The PROTICdb database for 2-DE proteomics, Methods Mol Biol, 355, 279-303.

arrow Vincent D., Ergul A., Bohlman M.C., Tattersall E.A., Tillett R.L., Wheatley M.D., Woolsey R., Quilici D.R., Joets J., Schlauch K., Schooley D.A., Cushman J.C. and Cramer G.R. (2007) Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity, J Exp Bot, 58, 1873-1892.


arrow Falque, M. Decousset L., Dervins D., Jacob A.M., Joets J., Martinant J.P., Raffoux X., Ribiere N., Ridel C., Samson D., Charcosset A. and Murigneux A. (2005) Linkage mapping of 1454 new maize candidate gene Loci, Genetics, 170, 1957-1966.

arrow Ferry-Dumazet H., Houel G., Montalent P., Moreau L., Langella O., Negroni L., Vincent D., Lalanne C., de Daruvar A., Plomion C., Zivy M., Joets J. (2005) PROTICdb: a web-based application to store, track, query, and compare plant proteome data. Proteomics. (2005) May;5(8):2069-81


arrow Arcade A., Labourdette A., Falque M., Mangin B., Chardon F., Charcosset A., Joets J. BioMercator: integrating genetic maps and QTL towards discovery of candidate genes. Bioinformatics. (2004) Sep 22;20(14):2321-6.

arrow Chardon F., Virlon B., Moreau L., Falque M., Joets J., Decousset L., Murigneux A. and Charcosset A. (2004) Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome, Genetics, 168, 2169-2185.


arrow Albini G., Falque M., Joets  J. (2003) ActionMap: A web-based software that automates loci asignments to a framework maps. Nucleic Acids Res. (2003) Jul 1;31(13):3815-8.