FrancaisEnglish (United Kingdom)
 

Publications des membres de ABI

11/04/17


2017

arrow Adam-Blondon A. F., Alaux M., Durand S., Letellier T., Merceron G., Mohellibi N., Pommier C., Steinbach D., Alfama F., Amselem J., Charruaud D., Choisne N., Flores R., Guerche C., Jamilloux V., Kimmel E., Lapalu N., Loaec M., Michotey C., Quesneville H. (2017) Mining Plant Genomic and Genetic Data Using the GnpIS Information System. Methods Mol Biol, 1533 103-117.

arrow Perronne R., Makowksi D., Goffaux R., Montalent P., Goldringer I. (2017) Temporal evolution of varietal, spatial and genetic diversity of bread wheat between 1980 and 2006 strongly depends upon agricultural regions in France. Agriculture, Ecosystems & Environment, 236 12-20.

 

2015

arrow Ressayre A., Glemin S., Montalent P., Serre-Giardi L., Dillmann C., Joets J. (2015) Introns Structure Patterns of Variation in Nucleotide Composition in Arabidopsis thaliana and Rice Protein-Coding Genes. Genome Biol Evol, 7 (10) 2913-28.

 

2014

arrow Bonnin, I., Bonneuil, C., Goffaux, R., Montalent, P., Goldringer, I. (2014) Explaining the decrease in the genetic diversity of wheat in France over the 20th century. Agr Ecosys Env, 195 183-192.

arrow Valente F., Gauthier F., Bardol N., Blanc G., Joets J., Charcosset A., Moreau L. (2014) OptiMAS: A Decision Support Tool to Conduct Marker-Assisted Selection Programs. Methods Mol Biol, 1145 97-116.


2013

arrow Sarilar V., Palacios P.M., Rousselet A., Ridel C., Falque M., Eber F., Chèvre A.M., Joets J., Brabant P., Alix K. (2012) Allopolyploidy has a moderate impact on restructuring at three contrasting transposable element insertion sites in resynthesized Brassica napus allotetraploids, New Phytol. 2013 Apr;198(2):593-604.

arrow Langella O, Valot B, Jacob D, Balliau T, Flores R, Hoogland C, Joets J, Zivy M(2013) Management and dissemination of MS proteomic data with PROTICdb: example of a quantitative comparison between methods of protein extraction, Proteomics. 2013 May;13(9):1457-66.

arrow Valente F, Gauthier F, Bardol N, Blanc G, Joets J, Charcosset A, Moreau L. (2013) OptiMAS: a decision support tool for marker-assisted assembly of diverse alleles, J Hered. 2013 Jul-Aug;104(4):586-90


2012

arrow Sosnowski O., Charcosset A., Joets J. (2012) BioMercator V3: an upgrade of genetic map compilation and quantitative trait loci meta-analysis algorithms. Bioinformatics. 2012 Aug 1;28(15):2082-3.

arrow Bonneuil, C., Goffaux, R., Bonnin, I., Montalent, P., Hamon, C., Balfourier, F. and Goldringer, I. (2012) A new integrative indicator to assess crop genetic diversity. Ecol Indic, 23 280-289.

arrow Vincent D., Kohler A., Claverol S., Solier E., Joets J., Gibon J., Lebrun M.H., Plomion C., Martin F. (2012) Secretome of the free-living mycelium from the ectomycorrhizal basidiomycete Laccaria bicolor, J Proteome Res. 2012 Jan 1;11(1):157-71.


2011

arrow Ganal M.W., Durstewitz G., Polley A., Bérard A., Buckler E.S., Charcosset A., Clarke J.D., Graner E.M., Hansen M., Joets J., Le Paslier M.C., McMullen M.D., Montalent P., Rose M., Schön C.C., Sun Q., Walter H., Martin O.C., Falque M. (2011) A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome, PLoS One. 2011;6(12):e28334.

arrow Sarilar V., Marmagne A., Brabant P., Joets J., Alix K. (2011) BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space, Plant Mol Biol. 2011 Sep;77(1-2):59-75.

arrow Wang S., Spor A., Nidelet T., Montalent P., Dillmann C., de Vienne D., Sicard D. (2011) Changing Glycolytic Genes Dosage Results in a Switch between Life-History Strategies in Saccharomyces cerevisiae, Appl Environ Microbiol., Nov 12.

arrow Corbi J., Debieu M., Rousselet A., Montalent P., Le Guilloux M., Manicacci D., Tenaillon MI. (2011) Contrasted patterns of selection since maize domestication on duplicated genes encoding a starch pathway enzyme, Theor Appl Genet., Nov. 9.


2010

arrow Montalent P. and Joets J. (2010) EuGene-maize: a web site for maize gene prediction, Bioinformatics, 26, 1254-1255.

arrow Hoogland C., O'Gorman M., Bogard P., Gibson F., Berth M., Cockell S.J., Ekefjard A., Forsstrom-Olsson O., Kapferer A., Nilsson M., Martinez-Bartolome S., Albar J.P., Echevarria-Zomeno S., Martinez-Gomariz M., Joets J., Binz P.A., Taylor C.F., Dowsey A. and Jones A.R. (2010)  Guidelines for reporting the use of gel image informatics in proteomics, Nat Biotechnol, 28, 655-656.


2009

arrow Albertin W., Langella O., Joets J., Negroni L., Zivy M., Damerval C. and Thiellement H. (2009) Comparative proteomics of leaf, stem, and root tissues of synthetic Brassica napus, Proteomics, 9, 793-799.

arrow Vincent D., Balesdent M.H., Gibon J., Claverol S., Lapaillerie D., Lomenech A.M., Blaise F., Rouxel T., Martin F., Bonneu M., Amselem J., Dominguez V., Howlett B.J., Wincker P., Joets J., Lebrun M.H. and Plomion C. (2009) Hunting down fungal secretomes using liquid-phase IEF prior to high resolution 2-DE, Electrophoresis, 30, 4118-4136.

arrow Zerjal T., Joets J., Alix K., Grandbastien M.A. and Tenaillon M.I. (2009) Contrasting evolutionary patterns and target specificities among three Tourist-like MITE families in the maize genome, Plant Mol Biol, 71, 99-114.


2008

arrow Alix K., Joets J., Ryder C.D., Moore J., Barker G.C., Bailey J.P., King G.J. and Pat Heslop-Harrison, J.S. (2008) The CACTA transposon Bot1 played a major role in Brassica genome divergence and gene proliferation, Plant J, 56, 1030-1044.


2007

arrow Langella O., Zivy M. and Joets J. (2007) The PROTICdb database for 2-DE proteomics, Methods Mol Biol, 355, 279-303.

arrow Vincent D., Ergul A., Bohlman M.C., Tattersall E.A., Tillett R.L., Wheatley M.D., Woolsey R., Quilici D.R., Joets J., Schlauch K., Schooley D.A., Cushman J.C. and Cramer G.R. (2007) Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity, J Exp Bot, 58, 1873-1892.


2005

arrow Falque, M. Decousset L., Dervins D., Jacob A.M., Joets J., Martinant J.P., Raffoux X., Ribiere N., Ridel C., Samson D., Charcosset A. and Murigneux A. (2005) Linkage mapping of 1454 new maize candidate gene Loci, Genetics, 170, 1957-1966.

arrow Ferry-Dumazet H., Houel G., Montalent P., Moreau L., Langella O., Negroni L., Vincent D., Lalanne C., de Daruvar A., Plomion C., Zivy M., Joets J. (2005) PROTICdb: a web-based application to store, track, query, and compare plant proteome data. Proteomics. (2005) May;5(8):2069-81


2004

arrow Arcade A., Labourdette A., Falque M., Mangin B., Chardon F., Charcosset A., Joets J. BioMercator: integrating genetic maps and QTL towards discovery of candidate genes. Bioinformatics. (2004) Sep 22;20(14):2321-6.

arrow Chardon F., Virlon B., Moreau L., Falque M., Joets J., Decousset L., Murigneux A. and Charcosset A. (2004) Genetic architecture of flowering time in maize as inferred from quantitative trait loci meta-analysis and synteny conservation with the rice genome, Genetics, 168, 2169-2185.


2003

arrow Albini G., Falque M., Joets  J. (2003) ActionMap: A web-based software that automates loci asignments to a framework maps. Nucleic Acids Res. (2003) Jul 1;31(13):3815-8.