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2017
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Le  17/04/18

Aguirre-Liguori J. A., Tenaillon M. I., Vazquez-Lobo A., Gaut B. S., Jaramillo-Correa J. P., Montes-Hernandez S., Souza V., Eguiarte L. E. (2017) Connecting genomic patterns of local adaptation and niche suitability in teosintes. Mol Ecol, 26 (16) 4226-4240.

Akakpo R., Scarcelli N., Chair H., Dansi A., Djedatin G., Thuillet A. C., Rhone B., Francois O., Alix K., Vigouroux Y. (2017) Molecular basis of African yam domestication: analyses of selection point to root development, starch biosynthesis, and photosynthesis related genes. BMC Genomics, 18 (1) 782.

Alix K., Gérard P. R., Schwarzacher T., Heslop-Harrison J. S. (2017) Polyploidy and interspecific hybridization: partners for adaptation, speciation and evolution in plants. Ann Bot, 120 (2) 183-194.

Baldy A., Jacquemot M.-P., Griveau Y., Bauland C., Reymond M., Mechin V. (2017) Energy Values of Registered Corn Forage Hybrids in France over the Last 20 Years Rose in a Context of Maintained Yield Increase. Am J Plant Science, 8 (9) 1449-1461.

Barot S., Allard V., Cantarel A., Enjalbert J., Gauffreteau A., Goldringer I., Lata J.-C., Le Roux X., Niboyet A., Porcher E. (2017) Designing mixtures of varieties for multifunctional agriculture with the help of ecology. A review. Agron Sustain Dev, 37 (13)

Bedoya C. A., Dreisigacker S., Hearne S., Franco J., Mir C., Prasanna B. M., Taba S., Charcosset A., Warburton M. L. (2017) Genetic diversity and population structure of native maize populations in Latin America and the Caribbean. PLoS One, 12 (4) e0173488.

Bolotin-Fukuhara M. (2017) Thirty years of the HAP2/3/4/5 complex. Biochim Biophys Acta - Gene Regul Mech, 1860 (5) 543-559.

Bonnot T., Bancel E., Alvarez D., Davanture M., Boudet J., Pailloux M., Zivy M., Ravel C., Martre P. (2017) Grain subproteome responses to nitrogen and sulfur supply in diploid wheat Triticum monococcum ssp. monococcum. Plant J, 91 (5) 894-910.

Borg J., Kiær L. P., Lecarpentier C., Goldringer I., Gauffreteau A., Saint-Jean S., Barot S., Enjalbert A. (2017) Unfolding the potential of wheat cultivar mixtures: A meta-analysis perspective and identification of knowledge gaps. Field Crops Research, 221 298-313.

Bouchet S., Bertin P., Presterl T., Jamin P., Coubriche D., Gouesnard B., Laborde J., Charcosset A. (2017) Association mapping for phenology and plant architecture in maize shows higher power for developmental traits compared with growth influenced traits. Heredity (Edinb), 118 (3) 249-259.

Brandenburg J. T., Mary-Huard T., Rigaill G., Hearne S. J., Corti H., Joets J., Vitte C., Charcosset A., Nicolas S. D., Tenaillon M. I. (2017) Independent introductions and admixtures have contributed to adaptation of European maize and its American counterparts. PLoS Genet, 13 (3) e1006666.

Brault V., Delattre M., Lebarbier E., Levy-Leduc C., Mary-Huard T. (2017) Estimating the Number of Block Boundaries from Diagonal Blockwise Matrices Without Penalization. Scand J Statistics, 44 (2) 563-580.

Bukreyeva I., Angoulvant A., Bendib I., Gagnard J. C., Bourhis J. H., Dargere S., Bonhomme J., Thellier M., Gachot B., Wyplosz B. (2017) Enterocytozoon bieneusi Microsporidiosis in Stem Cell Transplant Recipients Treated with Fumagillin1. Emerg Infect Dis, 23 (6) 1039-1041.

Canas R. A., Yesbergenova-Cuny Z., Simons M., Chardon F., Armengaud P., Quillere I., Cukier C., Gibon Y., Limami A. M., Nicolas S., Brule L., Lea P. J., Maranas C. D., Hirel B. (2017) Exploiting the Genetic Diversity of Maize Using a Combined Metabolomic, Enzyme Activity Profiling, and Metabolic Modeling Approach to Link Leaf Physiology to Kernel Yield. Plant Cell, 29 (5) 919-943.

Chiquet J., Mary-Huard T., Rogbin S. (2017) Structured regularization for conditional Gaussian graphical models. Stat Comput, 27 (3) 789-804.

Citerne H. L., Reyes E., Le Guilloux M., Delannoy E., Simonnet F., Sauquet H., Weston P. H., Nadot S., Damerval C. (2017) Characterization of CYCLOIDEA-like genes in Proteaceae, a basal eudicot family with multiple shifts in floral symmetry. Ann Bot, 119 (3) 367-378.

Damerval C., Becker A. (2017) Genetics of flower development in Ranunculales - a new, basal eudicot model order for studying flower evolution. New Phytol, 216 (2) 361-366.

Damerval C., Nadot S. (2017) Letter to the 21st century botanist: "What is a flower?" 6. The evo-devo of floral symmetry. Botany Letters, 164 (3) 193-196.

Delatola E. I., Lebarbier E., Mary-Huard T., Radvanyi F., Robin S., Wong J. (2017) SegCorr a statistical procedure for the detection of genomic regions of correlated expression. BMC Bioinformatics, 18 (1) 333.

Demeulenaere E., Goldringer I. (2017) Semences et transcription agroécologique : initiatives paysannes et sélection participative comme innovations de rupture. Nat Sci Soc, 25 (S55-S59)

Denis E., Kbiri N., Mary V., Claisse G., Conde E. S. N., Kreis M., Deveaux Y. (2017) WOX14 promotes bioactive gibberellin synthesis and vascular cell differentiation in Arabidopsis. Plant J, 90 (3) 560-572.

Durufle H., Clemente H. S., Balliau T., Zivy M., Dunand C., Jamet E. (2017) Cell wall proteome analysis of Arabidopsis thaliana mature stems. Proteomics, 17 (8)

Durufle H., Herve V., Balliau T., Zivy M., Dunand C., Jamet E. (2017) Proline Hydroxylation in Cell Wall Proteins: Is It Yet Possible to Define Rules? Front Plant Sci, 8 1802.

Durufle H., Herve V., Ranocha P., Balliau T., Zivy M., Chourre J., San Clemente H., Burlat V., Albenne C., Dejean S., Jamet E., Dunand C. (2017) Cell wall modifications of two Arabidopsis thaliana ecotypes, Col and Sha, in response to sub-optimal growth conditions: An integrative study. Plant Sci, 263 183-193.

Edel K. H., Marchadier E., Brownlee C., Kudla J., Hetherington A. M. (2017) The Evolution of Calcium-Based Signalling in Plants. Review. Curr Biol, 27 (13) R667-R679.

Fustier M. A., Brandenburg J. T., Boitard S., Lapeyronnie J., Eguiarte L. E., Vigouroux Y., Manicacci D., Tenaillon M. I. (2017) Signatures of local adaptation in lowland and highland teosintes from whole-genome sequencing of pooled samples. Mol Ecol, 26 (10) 2738-2756.

Giraud H., Bauland C., Falque M., Madur D., Combes V., Jamin P., Monteil C., Laborde J., Palaffre C., Gaillard A., Blanchard P., Charcosset A., Moreau L. (2017) Linkage Analysis and Association Mapping QTL Detection Models for Hybrids Between Multiparental Populations from Two Heterotic Groups: Application to Biomass Production in Maize (Zea mays L.). G3 (Bethesda), 7 (11) 3649-3657.

Giraud H., Bauland C., Falque M., Madur D., Combes V., Jamin P., Monteil C., Laborde J., Palaffre C., Gaillard A., Blanchard P., Charcosset A., Moreau L. (2017) Reciprocal Genetics: Identifying QTLs for General and Specific Combining Abilities in Hybrids Between Multiparental Populations from Two Maize (Zea mays L.) Heterotic Groups. Genetics, 207 (3) 1167-1180.

Gouesnard B., Negro S., Laffray A., Glaubitz J., Melchinger A., Revilla P., Moreno-Gonzalez J., Madur D., Combes V., Tollon-Cordet C., Laborde J., Kermarrec D., Bauland C., Moreau L., Charcosset A., Nicolas S. (2017) Genotyping-by-sequencing highlights original diversity patterns within a European collection of 1191 maize flint lines, as compared to the maize USDA genebank. Theor Appl Genet, 130 (10) 2165–2189.

Jean N., Dumont E., Herzi F., Balliau T., Laabir M., Masseret E., Mounier S. (2017) Modifications of the soluble proteome of a mediterranean strain of the invasive neurotoxic dinoflagellate Alexandrium catenella under metal stress conditions. Aquat Toxicol, 188 80-91.

Lamichhane J. R., Arseniuk E., Boonekamp P., Czembor J., Decroocq V., Enjalbert J., Finckh M. R., Korbin M., Koppel M., Kudsk P., Mesterhazy A., Sosnowska D., Zimnoch-Guzowska E., Messean A. (2017) Advocating a need for suitable breeding approaches to boost integrated pest management: a European perspective. Pest Manag Sci, Epub ahead of print.

Langella O., Valot B., Balliau T., Blein-Nicolas M., Bonhomme L., Zivy M. (2017) X!TandemPipeline: A Tool to Manage Sequence Redundancy for Protein Inference and Phosphosite Identification. J Proteome Res, 16 (2) 494-503.

Laporte F., Charcosset A., Mary-Huard T. (2017) Estimation of the relatedness coefficients from biallelic markers, application in plant mating designs. Biometrics, 73 (3) 885-894.

Lariepe A., Moreau L., Laborde J., Bauland C., Mezmouk S., Decousset L., Mary-Huard T., Fievet J. B., Gallais A., Dubreuil P., Charcosset A. (2017) General and specific combining abilities in a maize (Zea mays L.) test-cross hybrid panel: relative importance of population structure and genetic divergence between parents. Theor Appl Genet, 130 (2) 403-417.

Millan-Oropeza A., Henry C., Blein-Nicolas M., Aubert-Frambourg A., Moussa F., Bleton J., Virolle M. J. (2017) Quantitative Proteomics Analysis Confirmed Oxidative Metabolism Predominates in Streptomyces coelicolor versus Glycolytic Metabolism in Streptomyces lividans. J Proteome Res, 16 (7) 2597-2613.

Ousseini I. S., Bakasso Y., Kane N. A., Couderc M., Zekraoui L., Mariac C., Manicacci D., Rhone B., Barnaud A., Berthouly-Salazar C., Assoumane A., Moussa D., Moussa T., Vigouroux Y. (2017) Myosin XI is associated with fitness and adaptation to aridity in wild pearl millet. Heredity (Edinb), 119 (2) 88-94.

Pelé A., Falque M., Trotoux G., Eber F., Negre S., Gilet M., Huteau V., Lode M., Jousseaume T., Dechaumet S., Morice J., Poncet C., Coriton O., Martin O. C., Rousseau-Gueutin M., Chevre A. M. (2017) Amplifying recombination genome-wide and reshaping crossover landscapes in Brassicas. PLoS Genet, 13 (5) e1006794.

Perronne R., Diguet S., de Vallavieille-Pope C., Leconte M., Enjalbert J. (2017) A framework to characterize the commercial life cycle of crop varieties: Application to the case study of the influence of yellow rust epidemics on French bread wheat varieties. Field Crops Research, 209 159-167.

Perronne R., Makowski D., Goffaux R., Montalent P., Goldringer I. (2017) Temporal evolution of varietal, spatial and genetic diversity of bread wheat between 1980 and 2006 strongly depends upon agricultural regions in France. Agriculture Ecosystems & Environment, 236 12-20.

Regente M., Pinedo M., San Clemente H., Balliau T., Jamet E., de la Canal L. (2017) Plant extracellular vesicles are incorporated by a fungal pathogen and inhibit its growth. J Exp Bot, 68 (20) 5485-5495.

Richard M. M. S., Gratias A., Thareau V., Kim K. D., Balzergue S., Joets J., Jackson S. A., Geffroy V. (2017) Genomic and epigenomic immunity in common bean: the unusual features of NB-LRR gene family. DNA Res, Epub ahead of print.

Rincent R., Charcosset A., Moreau L. (2017) Predicting genomic selection efficiency to optimize calibration set and to assess prediction accuracy in highly structured populations. Theor Appl Genet, 130 (11) 2231-2247.

Rouzet A., Reboux G., Dalphin J. C., Gondouin A., De Vuyst P., Balliau T., Millon L., Valot B., Roussel S. (2017) An immunoproteomic approach revealed antigenic proteins enhancing serodiagnosis performance of bird fancier's lung. J Immunol Methods, 450 58-65.

Samal A., Martin O. C. (2017) Haldane, Waddington and recombinant inbred lines: extension of their work to any number of genes. J Genet, 96 (5) 795-800.

Senghor Y., Guitard J., Angoulvant A., Hennequin C. (2017) Cryptococcal antigen detection in broncho-alveolar lavage fluid. Med Mycol, Epub ahead of print

Villegente M., Marmey P., Job C., Galland M., Cueff G., Godin B., Rajjou L., Balliau T., Zivy M., Fogliani B., Sarramegna-Burtet V., Job D. (2017) A Combination of Histological, Physiological, and Proteomic Approaches Shed Light on Seed Desiccation Tolerance of the Basal Angiosperm Amborella trichopoda. Proteomes, 5 (3) 19.