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2007

Publications dans des revues à comité de lecture

  • Albertin W, Alix K, Balliau T, Brabant P, Davanture M, Malosse C, Valot B & Thiellement H. (2007). Differential regulation of gene products in newly synthesized Brassica napus allotetraploids is not related to gene function nor subcellular localization . BMC Genomics 8 : 56
  • Alix K., Lariagon C., Delourme R. and Manzanares-Dauleux M. (2007). Exploiting natural genetic diversity and mutant resources of Arabidopsis thaliana to study the A. thaliana - Plasmodiophora brassicae interaction. Plant Breeding 126: 218-221.
  • Camus-Kulandaivelu, L., J.B. Veyrieras, B. Gouesnard, A. Charcosset, and D. Manicacci. 2007. Evaluating the reliability of STRUCTURE outputs in case of relatedness between individuals. Crop Sci 47:885-890
  • Ciliberti S. , Martin O.C. and Wagner A. (2007) Robustness Can Evolve Gradually in Complex Regulatory Gene Networks with Varying Topology, PLoS Comput Biol 3(2): e15.
  • CilibertiS. , Martin O.C. and Wagner A. (2007) Innovation and robustness in complex regulatory gene networks, PNAS 104(34):13591-6.
  • Damerval C, Le Guilloux M, Jager M, Charon C. (2007). Diversity and evolution of CYCLOIDEA-Like TCP genes in relation to flower development in Papaveraceae. Plant Physiol. 143: 759-72.
  • Damerval C et Nadot S. (2007). Evolution of perianth and stamen characteristics with respect to floral symmetry in Ranunculales. /Ann. Bot./doi: 10.1093/aob/mcm041
  • Drouaud, J., Mercier, R, Chelysheva, L., Bérard, A., Falque, M., Martin, O., Zanni, V., Brunel, D., and C. Mézard. (2007). Sex-specific crossover distribution and variations in interference level along Arabidopsis thaliana chromosome 4. PLoS Genet 3(6): e106
  • Espagne, C., Martinez, A., Valot, B., Meinnel, T.,Giglione, C. (2007) Alternative and effective proteomic analysis in Arabidopsis. Proteomics, 7 3788–3799.
  • Falque, M., Mercier, R., Mézard, C., de Vienne, D., and O.C. Martin. (2007). Patterns of recombination rate along chromosomes : importance of interference and obligate chiasma, Genetics 176: 1453-1467.
  • Faurobert, M., Mihr, C., Bertin, N., Pawlowski, T., Négroni, L., Sommerer, N.,Causse, M. (2007) Major proteome variations associated with cherry tomato pericarp development and ripening. Plant Physiol, 143 1327–1346.
  • Gallais, A.,Bordes, J. (2007) The use of doubled haploids in recurrent selection and hybrid development in maize. Crop Science, 47 S190–S201.
  • Gallais, A., Coque, M., Le Gouis, J., Prioul, J.-L., Hirel, B.,Quillere, I. (2007) Estimating the proportion of nitrogen remobilization and of postsilking nitrogen uptake allocated to maize kernels by nitrogen-15 labeling. Crop Science, 47 685–693.
  • Gallais A., Moreau L., Charcosset A. (2007) Detection of marker-QTL associations by studying change in marker frequencies with selective genotyping. Theor Appl Genet, 114 (4): 669-681
  • Hirel, B., Gouis, J. L., Ney, B.,Gallais, A. (2007) The challenge of improving nitrogen use efficiency in crop plants: Towards a more central role for genetic variability and quantitative genetics within integrated approaches. J Exp Bot, 58 2369–2387.
  • Langella, O., Zivy, M.,Joets, J. (2007) The PROTICdb database for 2-DE proteomics. Methods Mol Biol, 355 279–303.
  • Liu, R., Vitte, C., Ma, J., Mahama, A. A., Dhliwayo, T., Lee, M.,Bennetzen, J. (2007) A GeneTrek analysis of the maize genome. Proc Natl Acad Sci U S A, 104 11844–11849.
  • Manicacci, D., Falque, M., Le Guillou, S., Piégu, B., Henry, A.M., Le Guillou, M., Damerval, C. & D. de Vienne (2007). Maize Sh2 gene is constrained by natural selection but escaped domestication. Journal of Evolutionary Biology 20 (2), 503–516.
  • Méchin V., Thévenot C., Le Guilloux M., Prioul J.L. and Damerval C. 2007. Developmental analysis of maize endosperm proteome suggests a pivotal role for PPDK in starch/protein balance. Plant Physiol. 143: 1203-1219.
  • Meimoun, P., Ambard-Bretteville, F., Francs-Small, C.-D. C., Valot, B.,Vidal, J. (2007) Analysis of plant phosphoproteins. Anal Biochem, 371 238–246.
  • Minic, Z., Jamet, E., Négroni, L., der Garabedian, A. P., Zivy, M.,Jouanin, L. (2007) A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. J Exp Bot, 58 2503–2512.
  • Moeller A., Tenaillon M.I. and Tiffin P. 2007. Population structure and its effects on patterns of nucleotide polymorphism in teosinte (Zea mays ssp. parviglumis). Genetics 176: 1799-1809.
  • Rhoné B., Raquin AL., Goldringer I. (2007) Strong linkage disequilibrium near the selected Yr17 resistance gene in a wheat population under dynamic management. Theor. Appl. Genet. 114:787–802
  • Sicard, D., Pennings, P.S., Grandclément, C., Acosta, J., Kaltz, O. and Shykoff, J. A. (2007). Specialization and local adaptation of a fungal parasite on two host species as revealed by two fitness traits. Evolution 61, 27-41.
  • Siol M., Bonnin I., Olivieri I., Prosperi J.M. and Ronfort J. (2007). Effective population size associated with self-fertilization: lessons from temporal changes in allele frequencies in the selfing annual Medicago truncatula. Journal of Evolutionary Biology 20: 2349-2360.
  • Sumedha, Martin O.C. and Wagner A. (2007), New structural variation in evolutionary searches of RNA neutral networks,BioSystems 90: 475-485.
  • Sumedha, Martin O.C. and Peliti L. (2007) Population size effects in evolutionary dynamics on neutral networks and toy landscapes, J. Stat. Mech. P05011.
  • Thuillet A-C., Tenaillon M.I., Anderson L.K., Mitchell S.E., Kresovich S., Stack S.M., Gaut B.S. and Doebley J (2007). A weak effect of background selection on trinucleotide microsatellites in maize. Journal of Heredity. 99(1): 45-55
  • Veyrieras, J.B., Goffinet B., and Charcosset A. (2007) MetaQTL: a package of new computational methods for the meta-analysis of QTL mapping experiments. BMC Bioinformatics 8(1):49.
  • Veyrieras, J.-B., Camus-Kulandaivelu, L., Gouesnard, B., Manicacci, D.,Charcosset, A. (2007) Bridging genomics and genetic diversity: Linkage disequilibrium structure and association mapping in maize and other cereals. Crop Science, 47 S60–S71.
  • Vincent, D., Ergul, A., Bohlman, M. C., Tattersall, E. A. R., Tillett, R. L., Wheatley, M. D., Woolsey, R., Quilici, D. R., Joets, J., Schlauch, K., Schooley, D. A., Cushman, J. C.,Cramer, G. R. (2007) Proteomic analysis reveals differences between Vitis vinifera L. cv. Chardonnay and cv. Cabernet Sauvignon and their responses to water deficit and salinity. J. Exp. Bot, 58 1873–1892.
  • Vitte, C., Chaparro, C., Quesneville, H.,Panaud, O. (2007) Spip and Squiq, two novel rice non-autonomous LTR retro-element families related to RIRE3 and RIRE8. Plant Science, 172 8–19.
  • Vitte, C., Panaud, O.,Quesneville, H. (2007) LTR retrotransposons in rice (Oryza sativa, L.): Recent burst amplifications followed by rapid DNA loss. BMC Genomics, 8 218.