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2011

Publications dans des revues à comité de lecture

  • Agrawal G. K., Job D., Zivy M., Agrawal V. P., Bradshaw R. A., Dunn M. J., Haynes P. A., van Wijk K. J., Kikuchi S., Renaut J., Weckwerth W., Rakwal R. (2011) Time to articulate a vision for the future of plant proteomics - A global perspective: An initiative for establishing the International Plant Proteomics Organization (INPPO). Proteomics, 11 (9) 1559-68.
  • Albert B., Raquin C., Prigent M., Nadot S., Brisset F., Yang M., Ressayre A. (2011) Successive microsporogenesis affects pollen aperture pattern in the tam mutant of Arabidopsis thaliana. Ann Bot, 107 (8) 1421-6.
  • Albert B., Ressayre A., Nadot S. (2011) Correlation between pollen aperture pattern and callose deposition in late tetrad stage in three species producing atypical pollen grains. Am J Bot, 98 (2) 189-96.
  • Albertin W., Marullo P., Aigle M., Dillmann C., de Vienne D., Bely M., Sicard D. (2011) Population size drives industrial Saccharomyces cerevisiae alcoholic fermentation and is under genetic control. Appl Environ Microbiol, 77 (8) 2772-84.
  • Ali S., Gautier A., Leconte M., Enjalbert J., de Vallavieille-Pope C. (2011) A rapid genotyping method for an obligate fungal pathogen, Puccinia striiformis f.sp. tritici, based on DNA extraction from infected leaf and Multiplex PCR genotyping. BMC Res Notes, 4 240.
  • Bahri B., Shah S., Hussain S., Leconte M., Enjalbert J., de Vallavieille C. (2011) Genetic diversity of wheat yellow rust in Pakistan and its relation with host resistance. Plant Pathol, 60 (4) 649-660.
  • Becker A., Alix K., Damerval C. (2011) The evolution of flower development: current understanding and future challenges. Ann Bot, 107 (9) 1427-31.
  • Bienvenut W. V., Espagne C., Martinez A., Majeran W., Valot B., Zivy M., Vallon O., Adam Z., Meinnel T., Giglione C. (2011) Dynamics of post-translational modifications and protein stability in the stroma of Chlamydomonas reinhardtii chloroplasts. Proteomics, 11 (9) 1734-50.
  • Burda Z., Krzywicki A., Martin O. C., Zagorski M. (2011) Motifs emerge from function in model gene regulatory networks. Proc Natl Acad Sci U S A, 108 (42) 17263-8.
  • Corbi J., Debieu M., Rousselet A., Montalent P., Le Guilloux M., Manicacci D., Tenaillon M. I. (2011) Contrasted patterns of selection since maize domestication on duplicated genes encoding a starch pathway enzyme. Theor Appl Genet, 122 (4) 705-22.
  • Dawson J. C., Rivière P., Berthellot J.-F., Mercier F., de Kochko P., Galic N., Pin S., Serpolay E., Thomas M., Giuliano S., Goldringer I. (2011) Collaborative Plant Breeding for Organic Agricultural Systems in Developed Countries. Sustainability, 3 (8) 1206-1223.
  • * Dereeper A., Nicolas S., Le Cunff L., Bacilieri R., Doligez A., Peros J. P., Ruiz M., This P. (2011) SNiPlay: a web-based tool for detection, management and analysis of SNPs. Application to grapevine diversity projects. BMC Bioinformatics, 12 134.
  • Dumont E., Bahrman N., Goulas E., Valot B., Sellier H., Hilbert J. L., Vuylsteker C., Lejeune-Henaut I., Delbreil B. (2011) A proteomic approach to decipher chilling response from cold acclimation in pea (Pisum sativum L.). Plant Sci, 180 (1) 86-98.
  • Enjalbert J., Dawson J. C., Paillard S., Rhone B., Rousselle Y., Thomas M., Goldringer I. (2011) Dynamic management of crop diversity: From an experimental approach to on-farm conservation. C R Biol, 334 (5-6) 458-68.
  • Espinosa-Soto C., Martin O. C., Wagner A. (2011) Phenotypic robustness can increase phenotypic variability after nongenetic perturbations in gene regulatory circuits. J Evol Biol, 24 (6) 1284-97.
  • Espinosa-Soto C., Martin O. C., Wagner A. (2011) Phenotypic plasticity can facilitate adaptive evolution in gene regulatory circuits. BMC Evol Biol, 11 5.
  • Ganal M. W., Durstewitz G., Polley A., Berard A., Buckler E. S., Charcosset A., Clarke J. D., Graner E. M., Hansen M., Joets J., Le Paslier M. C., McMullen M. D., Montalent P., Rose M., Schon C. C., Sun Q., Walter H., Martin O. C., Falque M. (2011) A large maize (Zea mays L.) SNP genotyping array: development and germplasm genotyping, and genetic mapping to compare with the B73 reference genome. PLoS One, 6 (12) e28334.
  • Gauthier F., Martin O. C., Falque M. (2011) CODA (crossover distribution analyzer): quantitative characterization of crossover position patterns along chromosomes. BMC Bioinformatics, 12 27.
  • Gervais C. E., Castric V., Ressayre A., Billiard S. (2011) Origin and diversification dynamics of self-incompatibility haplotypes. Genetics, 188 (3) 625-36.
  • Giraut L., Falque M., Drouaud J., Pereira L., Martin O. C., Mezard C. (2011) Genome-wide crossover distribution in Arabidopsis thaliana meiosis reveals sex-specific patterns along chromosomes. PLoS Genet, 7 (11) e1002354.
  • Hasson A., Plessis A., Blein T., Adroher B., Grigg S., Tsiantis M., Boudaoud A., Damerval C., Laufs P. (2011) Evolution and diverse roles of the CUP-SHAPED COTYLEDON genes in Arabidopsis leaf development. Plant Cell, 23 (1) 54-68.
  • Jolivet P., Boulard C., Bellamy A., Valot B., d'Andrea S., Zivy M., Nesi N., Chardot T. (2011) Oil body proteins sequentially accumulate throughout seed development in Brassica napus. J Plant Physiol, 168 (17) 2015-20.
  • Kalunke R. M., Janni M., Sella L., David P., Geffroy V., Favaron F., D'Ovidio R. (2011) Transcript analysis of the bean polygalacturonase inhibiting protein gene family reveals that Pvpgip2 is expressed in the whole plant and is strongly induced by pathogen infection. J Plant Pathol, 93 (1) 141-148.
  • Ligat L., Lauber E., Albenne C., San Clemente H., Valot B., Zivy M., Pont-Lezica R., Arlat M., Jamet E. (2011) Analysis of the xylem sap proteome of Brassica oleracea reveals a high content in secreted proteins. Proteomics, 11 (9) 1798-813.
  • Manaa A., Ben Ahmed H., Valot B., Bouchet J. P., Aschi-Smiti S., Causse M., Faurobert M. (2011) Salt and genotype impact on plant physiology and root proteome variations in tomato. J Exp Bot, 62 (8) 2797-813.
  • Martin O. C., Hospital F. (2011) Distribution of parental genome blocks in recombinant inbred lines. Genetics, 189 (2) 645-54.
  • Mezmouk S., Dubreuil P., Bosio M., Decousset L., Charcosset A., Praud S., Mangin B. (2011) Effect of population structure corrections on the results of association mapping tests in complex maize diversity panels. Theor Appl Genet, 122 (6) 1149-60.
  • Muyle A., Serres-Giardi L., Ressayre A., Escobar J., Glemin S. (2011) GC-biased gene conversion and selection affect GC content in the Oryza genus (rice). Mol Biol Evol, 28 (9) 2695-706.
  • Rousselle Y., Thomas M., Galic N., Bonnin I., Goldringer I. (2011) Inbreeding depression and low between-population heterosis in recently diverged experimental populations of a selfing species. Heredity (Edinb), 106 (2) 289-99.
  • Rousset M., Bonnin I., Remoue C., Falque M., Rhone B., Veyrieras J. B., Madur D., Murigneux A., Balfourier F., Le Gouis J., Santoni S., Goldringer I. (2011) Deciphering the genetics of flowering time by an association study on candidate genes in bread wheat (Triticum aestivum L.). Theor Appl Genet, 123 (6) 907-26.
  • Sabarly V., Bouvet O., Glodt J., Clermont O., Skurnik D., Diancourt L., de Vienne D., Denamur E., Dillmann C. (2011) The decoupling between genetic structure and metabolic phenotypes in Escherichia coli leads to continuous phenotypic diversity. J Evol Biol, 24 (7) 1559-71.
  • Samal A., Martin O. C. (2011) Randomizing genome-scale metabolic networks. PLoS One, 6 (7) e22295.
  • Samal A., Wagner A., Martin O. C. (2011) Environmental versatility promotes modularity in genome-scale metabolic networks. BMC Syst Biol, 5 135.
  • Sarilar V., Marmagne A., Brabant P., Joets J., Alix K. (2011) BraSto, a Stowaway MITE from Brassica: recently active copies preferentially accumulate in the gene space. Plant Mol Biol, 77 (1-2) 59-75.
  • Serpolay E., Dawson J. C., Chable V., Lammerts Van Bueren E., Osman A., Pino S., Silveri D., Goldringer I. (2011) Diversity of different farmer and modern wheat varieties cultivated in contrasting organic farming conditions in western Europe and implications for European seed and variety legislation. Org Agr, 1 (3) 127-145.
  • Serpolay E., Schermann N., Dawson J., Lammerts van Bueren E. T., Isabelle Goldringer I., Chable V. (2011) Phenotypic Changes in Different Spinach Varieties Grown and Selected under Organic Conditions. Sustainability, 3 (9) 1616-1636.
  • Sicard D., Legras J. L. (2011) Bread, beer and wine: yeast domestication in the Saccharomyces sensu stricto complex. C R Biol, 334 (3) 229-36.
  • Tenaillon M. I., Charcosset A. (2011) A European perspective on maize history. C R Biol, 334 (3) 221-8.
  • Tenaillon M. I., Hufford M. B., Gaut B. S., Ross-Ibarra J. (2011) Genome size and transposable element content as determined by high-throughput sequencing in maize and Zea luxurians. Genome Biol Evol, 3 219-29.
  • Thomas M., Dawson J. C., Goldringer I., Bonneuil C. (2011) Seed exchanges, a key to analyze crop diversity dynamics in farmer-led on-farm conservation. Genet Resour Crop Evol, 58 (3) 321-338.
  • Valot B., Langella O., Nano E., Zivy M. (2011) MassChroQ: a versatile tool for mass spectrometry quantification. Proteomics, 11 (17) 3572-7.
  • Virlouvet L., Jacquemot M. P., Gerentes D., Corti H., Bouton S., Gilard F., Valot B., Trouverie J., Tcherkez G., Falque M., Damerval C., Rogowsky P., Perez P., Noctor G., Zivy M., Coursol S. (2011) The ZmASR1 protein influences branched-chain amino acid biosynthesis and maintains kernel yield in maize under water-limited conditions. Plant Physiol, 157 (2) 917-36.
  • Wang S., Spor A., Nidelet T., Montalent P., Dillmann C., de Vienne D., Sicard D. (2011) Switch between life history strategies due to changes in glycolytic enzyme gene dosage in Saccharomyces cerevisiae. Appl Environ Microbiol, 77 (2) 452-9.
  • Warburton M., Wilkes G., Taba S., Charcosset A., Mir C., Dumas F., Madur D., Dreisigacker S., Bedoya C., Prasanna B., Xie C., Hearne S., Franco J. (2011) Gene flow among different teosinte taxa and into the domesticated maize gene pool. Genet Resour Crop Ev, 57 (8) 1243-1261.
  • Welcker C., Sadok W., Dignat G., Renault M., Salvi S., Charcosset A., Tardieu F. (2011) A common genetic determinism for sensitivities to soil water deficit and evaporative demand: meta-analysis of quantitative trait Loci and introgression lines of maize. Plant Physiol, 157 (2) 718-29.
  • Zhang Y., Giboulot A., Zivy M., Valot B., Jamet E., Albenne C. (2011) Combining various strategies to increase the coverage of the plant cell wall glycoproteome. Phytochemistry, 72 (10) 1109-23.